DC900201

Overview
NameDC900201
Unique NameDC900201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5643 contig Csv1_Contig5643:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.653e-27
Identity = 73/193 (37.82%), Postives = 108/193 (55.96%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHE--DALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+ + A+E    I  ++L+ L+EQ+LVDCD   + GC+GGL+  A+E I   GGV  E  YPY+A    C V          + +  V  + E  + LL+ V   P+++A+DA   D   Y  GV +      LNH V  VGYG   +   YW ++NSWG ++GE GY+R++RG++     CG+  E
Sbjct:  147 CGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF-VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVG--PIAIAVDA--VDLTDYYGGVISFCENNGLNHAVLLVGYGIE-NNVPYWTIKNSWGSDYGENGYVRIRRGVNS----CGMINE 329          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27
Identity = 68/196 (34.69%), Postives = 107/196 (54.59%), Query Frame = 1
Query:   10 RECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA---LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            + CG+CWAF+T+A++E    I  N  + LSEQ+++DCD   + GC+GGL+  AFE + + G +  E +YPY   +  C++  + +  V + G        E+    LL+AV   P+ +AIDA  S    Y  G+        LNH V  VGYG   +   +W  +N+WG +WGE+GY R+++ +      CG+  E
Sbjct:  135 KACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY-VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVG--PIPMAIDA--SGIVNYHHGIIHYCENYGLNHAVLLVGYGVE-NNVPFWTFKNTWGKDWGEEGYFRVRQNVD----ACGMTNE 320          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26
Identity = 78/206 (37.86%), Postives = 108/206 (52.43%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHI--MTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENV----PANHED------ALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECG-TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEA 591
            CGSCWAFS++A       +  +  K V  S Q +V CD   +  CNGG +   ++F+ K G  TT+   PY++   T    + + P    DG   V      +++D      A++KA++   P+ VA     SDF +Y  GV+    G  E  H V  VGYGT  DG  YWI++NSWGP+WGE GY RM RGI+D    C I  +A
Sbjct:   98 CGSCWAFSSVATFGDRRCVAGLDKKPVKYSPQYVVSCDHG-DMACNGGWLPNVWKFLTKTG-TTTDECVPYKSGSTTL---RGTCPTKCADGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLV-HSDFMYYESGVYQHTYGYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGIND----CSIEEQA 293          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25
Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK-KGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVP-ANHEDALLKAVAK-QPVSVAIDAGSSDFQFYSEGVFTGECGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEAS 594
            CG CWAFS + AVE    I    L  LS Q+++DC  + N GCNGG    A  ++ K +  +  +++YP++A +G C     S    SI G+     ++ ED + KA+    P+ V +DA S  +Q Y  G+    C + E NH V   G+  T   T YWIVRNSWG  WG  GY  ++ G      +CGIA   S
Sbjct:  129 CGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN-NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVS--WQDYLGGIIQHHCSSGEANHAVLITGFDKT-GSTPYWIVRNSWGSSWGVDGYAHVKMG----SNVCGIADSVS 317          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.618e-25
Identity = 75/228 (32.89%), Postives = 105/228 (46.05%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNK-LVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTL------------------------------DGTK-YWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPI 603
            CGSCWAF+++  VE +     NK +++LSEQE+VDC +  N GC+GG    +F +  + G +     Y Y+A D    ++      V++     V  N     L  V    V+V +   + DF FY  G+F G C  ELNH V  VGYG                                 DG + YWI++NSW   WGE G++R+ R        CGI +E  YPI
Sbjct:  360 CGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC-SKLNFGCDGGHPFYSFIYAIENG-ICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGV---TDDFSFYGGGIFNGTCTEELNHSVLLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENGFMRISRNKEGDNVFCGIGVEVFYPI 582          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.949e-25
Identity = 54/138 (39.13%), Postives = 85/138 (61.59%), Query Frame = 1
Query:  148 GGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTE-LNHGVAAVGYG---TTLDGTKYWIVRNSWGPEWGEKGYIRMQR 546
            GGL++ AF+++K  GG+ +E  YPY A   +C    E+S A ++  + ++P+   + ++   A  P+S AIDA    F+FY EG++    C +E ++HGV  VGYG   T  +  KYWI++NSWG +WG  GYI+M +
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKYRPENSVA-NVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAK 137          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 75/204 (36.76%), Postives = 103/204 (50.49%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHI--MTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQAND----GTC--------DVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECG-TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCWAFS++A+V        +  K V  S Q +V CD   +  C+GG +   + F+ K G  TT+   PYQ+      GTC        D+        ++D   + PA     ++KA+A   P+  A     SDF +Y  GV+    G  E  H V  VGYGT  DG  YWI++NSWGP+WGE GY R+ R  ++    CGI
Sbjct:   97 CGSCWAFSSVASVGDRRCFAGLDKKAVKYSPQYVVSCDRG-DMACDGGWLPSVWRFLTKTG-TTTDECVPYQSGSTGARGTCPTKCADGSDLPHLYKATKAVDYGLDAPA-----IMKALATGGPLQTAFTV-YSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNE----CGI 288          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23
Identity = 70/196 (35.71%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIM--TNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEA----KYPYQANDGTCDVSKESSPAVSIDGH------ENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELN---HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISD 558
            CGSCWAFS I         M    + VS S+Q L+ C  + N GC+GG  +  + F+   G  T E      Y +        V  + SP      H      ++VPA     +   VA  P+   I    +D  +Y  GV+    GT +N   H +  VGYGTT DGT YWI++NSWGP+WGE GY R+ RG+++
Sbjct:  102 CGSCWAFSAIGVFGDRRCAMGIDKEAVSYSQQHLISCSLE-NFGCDGGDFQPTWSFLTFTGATTAECVKYVDYGHTVASPCPAVCDDGSPIQLYKAHGYGQVSKSVPA----IMGMLVAGGPLQTMIVV-YADLSYYESGVYKHTYGT-INLGFHALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGVNE 290          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.709e-22
Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKK-KGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHE--NVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGT-ELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIA 582
            CG CWAFS ++A+E    I    L  LS Q+++DC  + N GC GG    A  ++ + +  +  +++YP++A +G C    +S   VS+      N     ++     ++  P+ V +DA S  +Q Y  G+    C + E NH V   G+  T   T YW+VRNSWG  WG +GY  ++ G      +CGIA
Sbjct:  120 CGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN-NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMS--WQDYLGGIIQHHCSSGEANHAVLITGFDRT-GNTPYWMVRNSWGSSWGVEGYAHVKMG----GNVCGIA 304          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22
Identity = 67/183 (36.61%), Postives = 92/183 (50.27%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSD---FQFY-SEGVFTGECGTELN-HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRG 549
            CGSCWAFS +AA E       N  + LSEQELVDC +    GC+G  +    E+I ++ GV  E  YPY A +  C   + +S    I  +  +       + +A+ +   ++A+  G  D   FQ Y    +   + G + N H V  VGYG+T  G  YWIVRNSW   WG+ GY   Q G
Sbjct:  130 CGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCAS--QHGCHGDTIPRGIEYI-QQNGVVEERSYPYVAREQRC--RRPNSQHYGISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNYHAVNIVGYGST-QGDDYWIVRNSWDTTWGDSGYGYFQAG 306          
The following BLAST results are available for this feature:
BLAST of DC900201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
CATV_NPVMC3.653e-2737.82Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATV_NPVBS6.232e-2734.69Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATB2_GIALA2.368e-2637.86Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CATO_HUMAN1.535e-2537.06Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CYSP_PLAVS7.618e-2532.89Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CATL1_FELCA9.949e-2539.13Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATB3_GIALA6.449e-2436.76Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CATB1_GIALA7.130e-2335.71Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATO_MOUSE2.709e-2233.16Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PEPT1_DERFA4.621e-2236.61Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]

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Properties
Property NameValue
Genbank descriptionDC900201 VSS Citrus sinensis cDNA clone VS28238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900201 ID=DC900201; Name=DC900201; organism=Citrus sinensis; type=EST; length=804bp
AATTCGGCACGAGAATGCGGTAGCTGCTGGGCTTTTTCAACAATTGCAGC
AGTAGAGGGCATTAATCACATTATGACAAATAAGCTCGTTTCTTTGTCTG
AGCAAGAGTTAGTTGATTGTGACACTGATCAAAACCAAGGATGTAATGGA
GGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAC
AACAGAGGCTAAGTACCCTTACCAAGCTAATGATGGAACATGTGACGTTT
CAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGACATGAAAATGTACCT
GCTAATCACGAGGATGCTCTGCTTAAGGCAGTTGCAAAACAGCCTGTGTC
AGTAGCCATAGATGCCGGCAGTTCAGATTTCCAGTTCTATTCAGAGGGTG
TATTTACTGGAGAATGTGGCACAGAGCTGAATCATGGAGTTGCAGCTGTG
GGCTACGGTACAACACTCGATGGAACCAAGTATTGGATAGTGAGGAACTC
ATGGGGACCTGAATGGGGAGAGAAGGGTTACATCAGAATGCAGCGCGGCA
TCTCAGACAAAAAGGGACTCTGTGGTATTGCAATGGAAGCTTCATATCCC
ATCAAGAAATCTGCAACAAACCCAACAGGACCTTCAGATTATCCTAAGGA
TGAGCTCTAGACACGGTTCACTATTGTCTTTGGCTTTTCTCTGCATTTCA
AGCTCAGCGGTTATCTCTTCTGTGTTAAAGTTGCATGTAATATGCCCTTG
TGATTCATGATTGAATAATGTTTCGATTTATGCAAATAAAGCCAACATTT
TACA
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