DC900201

Overview
NameDC900201
Unique NameDC900201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5643 contig Csv1_Contig5643:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 70/206 (33.98%), Postives = 98/206 (47.57%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTN--KLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQAND-GTCDVSKESSPAVSID----GHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTE----------LNHGVAAVGYGTT-LDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSC+A  + AA+E    +++N  +   LS Q +VDC +  ++GCNGG   L      +  G+  +   PY   D G C VSK  +   + D    G      N +   L+ ++  P  V  +    DFQFY EG++                  NH V  VGYG   L G  YW V+NSWG EWGE+GY R+ RG  +    CG+
Sbjct:  244 CGSCYASPSAAALEARIRLVSNFSEQPILSPQTVVDC-SPYSEGCNGGFPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRYYTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEV-YEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDE----CGV 443          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 60/177 (33.90%), Postives = 92/177 (51.98%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSD---FQFY-SEGVFTGECGTELN-HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGY 531
            CGSCWAFS +AA E       N+ + L+EQELVDC +    GC+G  +    E+I +  GV  E+ Y Y A + +C   + ++    I  +  +   + + + +A+A+   ++A+  G  D   F+ Y    +   + G + N H V  VGY +   G  YWIVRNSW   WG+ GY
Sbjct:  129 CGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYI-QHNGVVQESYYRYVAREQSC--RRPNAQRFGISNYCQIYPPNVNKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGY-SNAQGVDYWIVRNSWDTNWGDNGY 299          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 64/228 (28.07%), Postives = 105/228 (46.05%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGT----ELNHGVAAVGYGTTLDGTK----------------YWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI-----AMEASYPIKKSATN 621
            C  CWA +    ++ +  I   + V +S QEL+DC+   N GCNGG +  A+  +    G+ +E  YP+Q +        +    V+      + +N+E A+   +A   P++V I+      Q Y +GV      +    +++H V  VG+G   +G +                YWI++NSWG  WGEKGY R+ RG       CG+       +   P+KK+ T+
Sbjct:  148 CKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCERCGN-GCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKL--LQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRG----NNTCGVTKYPFTAQVDSPVKKARTS 368          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.906e-18
Identity = 68/201 (33.83%), Postives = 95/201 (47.26%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEG---INHIMTNK-LVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECG-TELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            +CGSCWAF++ AA+E    I +    K  + LS Q  V+C      GCNGG     F F K  G +  E   PY+A  GT  ++  S        +       + ALL  + K PV++A+   S+ FQ Y  G++      T +NH V  VGY    D  K   ++NSWG  WGE GY+R+    +    L   A  + YP
Sbjct:  258 QCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNCIAS---GCNGGWSGNYFNFFKTPG-IAYEKDDPYKAVTGTSCITTSSVARFKYTNY-GYTEKTKAALLAELKKGPVTIAVYVDSA-FQNYKSGIYNSATKYTGINHLVLLVGYDQATDAYK---IKNSWGSWWGESGYMRI---TASNDNLAIFAYNSYYP 446          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17
Identity = 70/227 (30.84%), Postives = 102/227 (44.93%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNKLVS--LSEQELVDCDTDQNQGCNGGLMELAFEFIKKKG---GVTTEAKY---PYQANDGTCDVSKESSPAVSIDGHENVPA-----------------NHEDALLKAVAKQ------------PVSVAIDAGSSDFQFYSEGVFTGECGTELN-HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            +CGSCWAF+   A      I +N  V+  LS ++++ C ++   GC GG    A++++ K G   G + EA++   PY        V   + P+   DG++  PA                  H  +   AV K+            PV  A      DF  Y  GV+    G EL  H +  +G+GT  +GT YW+V NSW   WGE GY R+ RG ++    CGI
Sbjct:  105 DCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDT-PACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTV-YEDFYQYKTGVYVHTTGQELGGHAIRILGWGTD-NGTPYWLVANSWNVNWGENGYFRIIRGTNE----CGI 324          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.701e-16
Identity = 64/229 (27.95%), Postives = 97/229 (42.36%), Query Frame = 1
Query:   10 RECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGE---CGTEL-NHGVAAVGYGTTLDG-------------------TKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYPIKKSATNP 624
            + C  CWA +    +E +  I     V +S QEL+DC      GC+GG +  AF  +    G+ +E  YP+Q          +    V+      +  N+E  + + +A   P++V I+      Q Y +GV       C  +L +H V  VG+G+                       T YWI++NSWG +WGEKGY R+ RG       CGI     +P+      P
Sbjct:  148 KNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDCGRC-GDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINM--KPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRG----SNTCGI---TKFPLTARVQKP 366          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.881e-15
Identity = 62/193 (32.12%), Postives = 88/193 (45.60%), Query Frame = 1
Query:   16 CGSCWAF-STIAAVEGINHIMTNKLVS--LSEQELVDCDTDQNQG-CNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSID-------------GHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRM 540
            CGSCWA  ST A  + IN        S  LS Q ++DC    N G C GG     +E+  K G +  E    YQA D  CD   +                     G     +  E  + +  A  P+S  I A +     Y+ G++T  +    +NH ++  G+G + DG +YWIVRNSWG  WGE+G++R+
Sbjct:   91 CGSCWAHGSTSALADRINIKRKGAWPSTLLSVQNVIDCG---NAGSCEGGNDLPVWEYAHKHG-IPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMA-TERMSNYTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI 278          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 83.1889 bits (204), Expect = 1.881e-15
Identity = 66/226 (29.20%), Postives = 95/226 (42.04%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSL---SEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVT----------------------TEAKYPYQANDGTCDVSKESSPAVSIDGHENVP--------ANHEDALLKAVAKQ-PVSVAIDAGSSDFQFYSEGVFTGECGTELN-HGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CGSCWAF  + A+     I +N  V++   +E  L  C  +   GCNGG    A+ F  KKG V+                        ++ P      T   SK   P  S    E+          AN+E  ++  + K  PV  A     SDF  Y  GV+    G  +  H +  +G+G   +GT YW+V NSW  +WG+ G+ ++ RG    +  CGI  E
Sbjct:  105 CGSCWAFGAVEAISDRICIHSNGRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSV-YSDFLLYKSGVYQHVSGEIMGGHAIRILGWGVE-NGTPYWLVGNSWNTDWGDNGFFKILRG----QDHCGIESE 324          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.456e-15
Identity = 64/222 (28.83%), Postives = 102/222 (45.95%), Query Frame = 1
Query:   16 CGSCWAFSTIA-AVEGIN-HIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKE----------------------SSPAVSIDGHENVP----ANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFT------GECGTELNHGVAAV---GYG--TTLDGT--KYWIVRNSWGPEWGEKGYIRMQRGISD 558
            C   WAFST A A + ++ H + +    LS Q L+ CDT   +GC GG ++ A+ F++++G V ++  YP+   +   + S                        +S   S D ++  P    A+ E  ++K + +     A+     DF  Y  G+++      G       HG  +V   G+G  T  DG   KYW   NSWGP WGE+G+ R+ RGI++
Sbjct:  225 CAGSWAFSTAAVASDRVSIHSLGHMTPILSPQNLLSCDTHHQKGCRGGRLDGAWWFLRRRG-VVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALMEVHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGINE 445          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATZ_MOUSE (Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15
Identity = 62/193 (32.12%), Postives = 87/193 (45.08%), Query Frame = 1
Query:   16 CGSCWAF-STIAAVEGINHIMTNKLVS--LSEQELVDCDTDQNQG-CNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSID-------------GHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRM 540
            CGSCWA  ST A  + IN        S  LS Q ++DC    N G C GG     +E+  K G +  E    YQA D  CD   +                     G     +  E  + +  A  P+S  I A +     Y+ G++   +    +NH ++  G+G + DG +YWIVRNSWG  WGEKG++R+
Sbjct:   91 CGSCWAHGSTSAMADRINIKRKGAWPSILLSVQNVIDCG---NAGSCEGGNDLPVWEYAHKHG-IPDETCNNYQAKDQDCDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMA-TEMMSNYTGGIYAEHQDQAVINHIISVAGWGVSNDGIEYWIVRNSWGEPWGEKGWMRI 278          
The following BLAST results are available for this feature:
BLAST of DC900201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
CATC_SCHMA4.326e-2033.98Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
PEPT1_DERPT2.804e-1933.90Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATW_MOUSE3.662e-1928.07Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
GMSA_DICDI6.906e-1833.83Gamete and mating-type specific protein A OS=Dicty... [more]
CPR4_CAEEL7.635e-1730.84Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATW_HUMAN1.701e-1627.95Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATZ_RAT1.881e-1532.12Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
CATB_BOVIN1.881e-1529.20Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
TINAL_RAT2.456e-1528.83Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATZ_MOUSE3.208e-1532.12Cathepsin Z OS=Mus musculus GN=Ctsz PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900201 VSS Citrus sinensis cDNA clone VS28238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900201 ID=DC900201; Name=DC900201; organism=Citrus sinensis; type=EST; length=804bp
AATTCGGCACGAGAATGCGGTAGCTGCTGGGCTTTTTCAACAATTGCAGC
AGTAGAGGGCATTAATCACATTATGACAAATAAGCTCGTTTCTTTGTCTG
AGCAAGAGTTAGTTGATTGTGACACTGATCAAAACCAAGGATGTAATGGA
GGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAC
AACAGAGGCTAAGTACCCTTACCAAGCTAATGATGGAACATGTGACGTTT
CAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGACATGAAAATGTACCT
GCTAATCACGAGGATGCTCTGCTTAAGGCAGTTGCAAAACAGCCTGTGTC
AGTAGCCATAGATGCCGGCAGTTCAGATTTCCAGTTCTATTCAGAGGGTG
TATTTACTGGAGAATGTGGCACAGAGCTGAATCATGGAGTTGCAGCTGTG
GGCTACGGTACAACACTCGATGGAACCAAGTATTGGATAGTGAGGAACTC
ATGGGGACCTGAATGGGGAGAGAAGGGTTACATCAGAATGCAGCGCGGCA
TCTCAGACAAAAAGGGACTCTGTGGTATTGCAATGGAAGCTTCATATCCC
ATCAAGAAATCTGCAACAAACCCAACAGGACCTTCAGATTATCCTAAGGA
TGAGCTCTAGACACGGTTCACTATTGTCTTTGGCTTTTCTCTGCATTTCA
AGCTCAGCGGTTATCTCTTCTGTGTTAAAGTTGCATGTAATATGCCCTTG
TGATTCATGATTGAATAATGTTTCGATTTATGCAAATAAAGCCAACATTT
TACA
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