DC900195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.548e-70 Identity = 127/238 (53.36%), Postives = 167/238 (70.17%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+A+Y E+V++VS LK +G+ P +PF+P S F GDN+ + S WYKGP ++ ALD + EP++PS PLR+P++D Y I GIGTVPVGRVETGV+K G V F P G EV Sbjct: 40 EKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVM-------AQTKEHIFLSRTLGINQLIIAINKMDAV--EYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVIFMPGGAGGEV 268
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.246e-70 Identity = 122/235 (51.91%), Postives = 169/235 (71.91%), Query Frame = 1 Query: 10 EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E+ A ++ K S KYA+++D+LK ERERG+TI+++ +FET KY+ TVIDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +L+ T+G+ Q+I NKMD Y + R+ EIV VS ++K G++ KV FVP+ +GDN+ +ST + WY GPTL + LD + P +P DKPLR+P+Q+VY I G+G VPVGR+E+GVLK G + F P G EV Sbjct: 42 EEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILSKTMGINQVIVAINKMDLADTPYDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVAPDGDNVTHKSTKMPWYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVGKIGEV 276
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.246e-70 Identity = 129/238 (54.20%), Postives = 165/238 (69.33%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E + KEA K +F++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S +K VGY PE+ F+PIS +G N+ S WYKGP L+ ALD EP +P+DKPLRLP+QD Y I GIGTVPVGRVETG++K GM V+F P+ E+ Sbjct: 40 EAYRKEAESKGKATFEFAWVMDNLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQGINIKANSPETPWYKGPALIPALDTFKEPSKPTDKPLRLPIQDSYSISGIGTVPVGRVETGIMKKGMKVSFMPANKDGEI 268
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.753e-69 Identity = 127/238 (53.36%), Postives = 166/238 (69.75%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P +PFVP S F GDN++ S WYKG T+++AL+N+ P++PS PLR+P++D Y I GIGTVPVGRVETG +K G V F P G EV Sbjct: 40 EKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGEV 268
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.696e-69 Identity = 125/238 (52.52%), Postives = 166/238 (69.75%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E F KEA K SF++AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q++ NKMDA Y + R++E+ KE++ + VGY ++ F+P+S F+G N+ ++S WY GPTLL+ALD EP +P+DKP RLP+QDVY I GIGTVPVGR+ETG++K GM V+F P+ E+ Sbjct: 40 ENFRKEAESKGKGSFEFAWVMDNLKEERERGITIDIAHKRFDTAKFYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQLVIAINKMDAVN--YDQKRFEEVKKELTQLIGMVGYKAAEILFIPMSSFKGVNISKKSPETPWYTGPTLLEALDTFKEPDKPTDKPFRLPIQDVYSISGIGTVPVGRIETGIMKKGMKVSFMPANKDGEI 268
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 8.857e-68 Identity = 125/238 (52.52%), Postives = 164/238 (68.91%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E+ KEA E K +F++AWV+D+LK ERERG+TID+A KF+T KYY T++D PGHRDFIKNMITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS LK VGY +++PF+P+S + GDN+ ++S WY GPTLL+A D + P++ DKPLR+P+QDVY I G+GTVPVGRVE+GVL+ G V F P+G++ EV Sbjct: 40 EKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRVN--YDQKEYEAAKEAVSKLLKMVGYKVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVSGEV 268
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67 Identity = 129/234 (55.13%), Postives = 169/234 (72.22%), Query Frame = 1 Query: 1 ERFEKEAAEMNKR--SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPS 696 E+ K+ EM ++ SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVLI+ +T G QT+EHA LA TLG+ +I NKMDA KY + R+ E+ +V+ L+ +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP++P+DKPLR+P+QDVY I G+GTVPVGRVETGVLK G + F P+ Sbjct: 36 EQIIKKFEEMGEKGKSFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLLQMLGY--KNFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDVIIFEPA 258
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 4.396e-67 Identity = 127/242 (52.48%), Postives = 169/242 (69.83%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVSLL 723 ER ++EA+E K F++A+V+D LK ERERG+TIDIA KFE+ KY T++D PGHRDFIKNMITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ L K +GYNP + FVP++ F GDN +++S + WYKGPTL++ +D N P++P++ PLR+P+QDVY I G+GTVPVGRVETGV+KPG V F P+G++ E+ + Sbjct: 40 ERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTI 275
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.741e-67 Identity = 122/235 (51.91%), Postives = 161/235 (68.51%), Query Frame = 1 Query: 10 EKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E EA ++ K FKYAW++D+LK ERERG+TI+ FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ KVPF+P+S GDN+ +S+N+ WY GP LL+ALD I P RP DKPLRLP+QDV+ I G GTV GRVE+GV+K G + P +V Sbjct: 52 EAEAKKLGKEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVITGRVESGVVKVGDTIVALPPAKVGDV 284
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 9.793e-67 Identity = 122/231 (52.81%), Postives = 164/231 (71.00%), Query Frame = 1 Query: 16 EAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTT 708 E ++ + K+ ++D L+ ERERG+TID+A KFET Y T++D PGHRDF+KNMITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GYN +++PF+PIS FEGDN++E+S N WY GPTLL+ALDN+ P++P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G V F P+ T Sbjct: 35 EDKDLGEGEDKFRVIMDTLEEERERGVTIDLAHTKFETDNYEFTIVDCPGHRDFVKNMITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLVD--YDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVYSITGVGTVPVGRVETGVLEVGDTVRFEPAYTAT 256 The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bpback to top |