DC900195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_CORK4 (Elongation factor Tu OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 83/205 (40.49%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +DK E+ERGITI+IA ++ T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + ++ E P V IS EGD E+S LD L+DA D +I +P R +DKP +P++D++ I G GTV GRVE G L Sbjct: 52 IDKAPEEKERGITINIAHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEDLIELVEMEVRELLAEQDFD-EDAPIVHISALKALEGDEKWEQSI-LD------LMDACDESIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGKL 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_CHLT3 (Elongation factor Tu OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tuf PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 75/204 (36.76%), Postives = 114/204 (55.88%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 666 +DK E+ERGITI + ++ET + ID PGH D++KNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + E+ + +SSY G+ + +P + +G + + +W K L++A+DN I P R DKP +P++DV+ I G GTV GR+E GV+K Sbjct: 50 IDKAPEEKERGITISTSHVEYETPSRHYAHIDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVNVPSIVVFMNKVDIADPELIELVEMELRELLSSY----GFPGDDIPII-----QGSALGALNGEAEWVGKIEELMEAVDNYIPTPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGVIK 237
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_ANAPZ (Elongation factor Tu OS=Anaplasma phagocytophilum (strain HZ) GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.996e-27 Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + D ++E+ L + GY+ + + V S + +E + W K L+ AL+ I P R DKP + ++DV+ I G GTV GR+E GV++ G Sbjct: 48 IDKAPEEKARGITISTAHVEYETEGRHYAHVDCPGHADYIKNMITGAAQMDVAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWINKCDVVEDEEMLSLVDMEIREL---LSQYGYDGDSIDAVRGSAVKA---LEEDADGPWSDKIMELVGALEKIELPMREKDKPFLMSVEDVFSIPGRGTVVTGRIERGVVRVG 239
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 75/207 (36.23%), Postives = 113/207 (54.59%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 +D E+ERGITI+ + +++T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV ++ NK+D K E+V+ E+ L K Y+ E +P + +G + + W K TL+ +DN I EP R DKP +P++DV+ I G GTV GR+ETG + G Sbjct: 50 IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII-----QGSALGALNGEKKWEKQIETLMKTVDNYIKEPIRNIDKPFLMPIEDVFTITGRGTVATGRIETGTINTG 240
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_STRCJ (Elongation factor Tu OS=Streptomyces cinnamoneus GN=tuf PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 84/233 (36.05%), Postives = 120/233 (51.50%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVSLLRCTTSXAG 747 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA GV ++ NK D + + V+E+ S + G N V + EGD +W G LL + +NI +P+R DKP +P++DV+ I G GTV GR+E GVLK + T G+ TE + TT+ G Sbjct: 52 IDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQSGVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFDGDNCPVVQVSALKALEGDK--------EW--GEKLLGLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLK--VNETVDIIGIKTE----KTTTTVTG 261
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_CORGL (Elongation factor Tu OS=Corynebacterium glutamicum GN=tuf PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 80/208 (38.46%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +DK E+ERGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + Y+ E+ P V IS EGD W G +L+ + DNI +P R +DKP +P++D++ I G GTV GRVE G L Sbjct: 52 IDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVE---DEEIIELVEMEVRELLAEQDYD-EEAPIVHISALKALEGDE--------KW--GKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_CORGB (Elongation factor Tu OS=Corynebacterium glutamicum (strain R) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 80/208 (38.46%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +DK E+ERGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + Y+ E+ P V IS EGD W G +L+ + DNI +P R +DKP +P++D++ I G GTV GRVE G L Sbjct: 52 IDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVE---DEEIIELVEMEVRELLAEQDYD-EEAPIVHISALKALEGDE--------KW--GKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 77/215 (35.81%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV----GYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNIN----EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXV 681 +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV M+ NK D DE+++ V L+++ + + VPF+ G ++ D K + + +D I+ EP+R D+P +P++DV+ I G GTV GRVE G++K G V Sbjct: 50 IDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTREHILLARQVGVPAMVVFLNKCDMVDD-------DELIELVEMELRELLDDYEFPGDDVPFI-----HGSALLALENPEDEDKAACIWELMDQIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEV 245
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_CHRVO (Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum GN=cysN PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 80/245 (32.65%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 7 FEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 FE + A + + S KY A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S ++ A+++ID+ G QTR H+ + LG++ +I NKMD YS+ Y+ I E ++ + + + + FVPIS GDN++ R+ WY+G TL+ L+ + RLP+Q V + G + +G + PG V PSG + V Sbjct: 52 FEDQLAAIERDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRG-------VQTQTRRHSYIVSLLGIRHVIVAVNKMDLV--DYSEDVYNRIRDEYLTFAEHL--DIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLSAFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRV 285
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_STRAU (Elongation factor Tu OS=Streptomyces aureofaciens GN=tuf1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.405e-27 Identity = 84/236 (35.59%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVSLLRCTTSXAG 747 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + +P V +S EGD +W G LL +D ++E P R +DKP +P++DV+ I G GTV GR+E GVLK + T G+ TE + TT+ G Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSEYDFPGDDLPVVQVSALKALEGDK--------EW--GDKLLGLMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGTVVTGRIERGVLK--VNETVDIIGIKTE----KTTTTVTG 261 The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bpback to top |