DC900193

Overview
NameDC900193
Unique NameDC900193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1131
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 7.358e-33
Identity = 66/104 (63.46%), Postives = 79/104 (75.96%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG KF DENF+ K  GPGILSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+ + GS +G+T+K + I DCGQL
Sbjct:   61 MCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 7.358e-33
Identity = 66/104 (63.46%), Postives = 79/104 (75.96%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG KF DENF+ K  GPGILSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+V EGM++V+A+ + GS +G+T+K + I DCGQL
Sbjct:   61 MCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 2.796e-32
Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG KF DENF+ K  GPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+   GS +G+T+K + I +CGQL
Sbjct:   61 MCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSKKITIANCGQL 164          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 6.229e-32
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 551
            ESIYG KF DENF  K  GPG+LSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+VVEG+DVVKA+   GS SG+  K  +I DCGQL
Sbjct:   83 ESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.367e-31
Identity = 68/104 (65.38%), Postives = 74/104 (71.15%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           GESIYG+KFADENF  K  G G LSMANAG  TNGSQFF+C A T+WLDGKHVVFG V EGMDVVK +   GS SG+T KPVVI +CGQL
Sbjct:   76 MCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.367e-31
Identity = 65/104 (62.50%), Postives = 75/104 (72.12%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG+KF DENF  K  GPGIL MANAGP TNGSQFF+ TAKT WLD +HVVFG VVEGMDVVK +  +GS SG+TNK + + DCGQ+
Sbjct:   61 MCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.367e-31
Identity = 67/104 (64.42%), Postives = 76/104 (73.08%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           GESIYGSKF DENF  K  GPGILSMAN+GP TNGSQFF+CT KT WLDGKHVVFG+VV+G +VVKA+  VGS  G  ++ VVI DCG+L
Sbjct:   68 MCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.273e-31
Identity = 66/104 (63.46%), Postives = 76/104 (73.08%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG KF DENFV K  GPG LSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVV GM+VV+ + + GS+SG+ +K VVI DCG+L
Sbjct:  212 MCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGEL 315          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.004e-30
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 596
            MCQ           G+SIYG KFADENF  K   PGILSMANAG  TNGSQFF+CTA T WLDGKHVVFG V +G+D++K +   GS SG+T+K + I DCGQL
Sbjct:   61 MCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.299e-29
Identity = 61/89 (68.54%), Postives = 68/89 (76.40%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 551
            ESIYG KF DENF  K  GPG+LSMANAGP TNGSQFF+CT KT WLDGKHVVFG+VVEG+D+V  +   GSSSG      +I DCGQL
Sbjct:   83 ESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171          
The following BLAST results are available for this feature:
BLAST of DC900193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PPIA_SAGOE7.358e-3363.46Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR7.358e-3363.46Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
PPIA_RABIT2.796e-3263.46Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
CYP3_CAEEL6.229e-3273.03Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
PPIA_DICDI2.367e-3165.38Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPIA_BLAGE2.367e-3162.50Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
CP19C_ARATH2.367e-3164.42Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIE_RHIOR5.273e-3163.46Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIA_HEMPU2.004e-3060.58Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYP7_CAEEL1.299e-2968.54Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionDC900193 VSS Citrus sinensis cDNA clone VS28229 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900193 ID=DC900193; Name=DC900193; organism=Citrus sinensis; type=EST; length=1131bp
CGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAA
GACAAGCCCTATNTTATTTAAAANGGCAGCTCATAGAAAGACATAAAAAA
CAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAA
CATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACNCGGCCACA
TAATAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGNG
ATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCA
GNGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTNTC
GATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGT
GCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGAT
CCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGN
GNGCTTNTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGATTGATT
CGCCTCCGGTTCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGCTC
GTGCCGAATTCGGCACGAGGTTTCGTACAATAAAGAGCCCTCTATTTCCA
GTTTTAAATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGC
AACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTA
TGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTG
TCATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCC
ACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACAC
ATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTT
AAGAATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTT
TTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCAC
CCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATAT
GGCCATGGCCATGACCGTGGCCTTGTGTGGT
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