DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPTV5_VOLCA (GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 52/164 (31.71%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV--KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 550 K++I+GD G GKT+ + +++ +F K+Y+ TIG + + + K+ WDTAGQE+F L +Y C +++FDV ++ ++ W + +N P V+ GNK+D NRQV K+ K ++ Y+E SAK + N E F + R Sbjct: 10 KIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKIDEVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITR 173
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 63/204 (30.88%), Postives = 99/204 (48.53%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL----------AGDPNLHFVESPALAPPEVQIDLADSNT*SRAC 655 FK V++GD G GK+ + R EF + + TIGVE + + KI+ WDTAGQE++ + YY A+I++D+T + ++ NV W ++L + NI I+L GNK D+ + R V ++ F + NL + E SA N E+ F + ++ AGD +H L DL + S+ C Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 65/199 (32.66%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAP-PEVQIDLADSNT 640 SQ+ DY +K+V++GD G GK+ + R EF + + TIGVE T I+ WDTAGQE++ + YY A++++D+ + TYK+V W +L + NI I+L GNK D+++ R+V + F K L + E SA + N E F + ++ H + P+ + P+ I DSNT Sbjct: 6 SQEEYDY-LYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQI-----YHIMSRPSHSTGPQTTI---DSNT 195
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLADSNT*SRA 652 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ R V+ ++ + N L + E SAK+ N + F+ +A+KL + + +P +DL ++N SR+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG---RNRGVDLQENNPASRS 211
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLADSNT*SRA 652 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ R V+ ++ + N L + E SAK+ N + F+ +A+KL + + +P +DL ++N SR+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG---RNRGVDLQENNPASRS 211
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.655e-19 Identity = 58/173 (33.53%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVES 589 + K++I+G+ G GK++ + R F+ + TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + E SAK+ + F L K+ P L ES Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 58/168 (34.52%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDV-------KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 + K+V++G+ GK++ V R ++ +F++ EPTIG + I+F WDTAGQE+F L YY + Q A+++FDVT ++ W +L +V +I I L GNK+D+ +NR +KA V ++NL Y+E SAK+ N + F L K+ Sbjct: 12 TIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKV 179
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 52/161 (32.30%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDTAGQE+F + YY I+++DVT + ++ NV W ++ R CEN+ +L GNK D+ ++V + F +++ E SAK+ N EK F+ +A ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 59/185 (31.89%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLA 628 FK+V++GD G GK+ + R EF + + TIGVE ++ WDTAGQE++ + YY A++ +D+T R T+ NV W R+L NI I+L GNK D+K+ + ++Q +K+ L + E SA N +K F + + H + ALA E A Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDI-----YHIISKKALAAQEAAASTA 192
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.467e-19 Identity = 62/193 (32.12%), Postives = 98/193 (50.78%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLADSNT*SRA 652 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ ++ Q T+ +L + E SAK+ N + F+ +A+KL P +P +DL +S+ SR+ Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKL---PKNEPQNAPGGPGRNRVVDLQESSQPSRS 211 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |