DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:410..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 7.210e-52
Identity = 99/138 (71.74%), Postives = 116/138 (84.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            HL+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD  E+GG++ K
Sbjct:  113 HLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.210e-52
Identity = 101/149 (67.79%), Postives = 119/149 (79.87%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PG 451
            HL+PS+ + ES VFY KMKGDY+RYLAEFK  D+RK+AA+ ++           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSL EESYKDSTLIMQLLRDNLTLWTSD  ++GG++ K  E  A   PG
Sbjct:  117 HLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIK--EAAAPKEPG 263          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.606e-51
Identity = 106/158 (67.09%), Postives = 120/158 (75.95%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 475
            +HLIP++T+GES VFYYKMKGDYYRYLAEF   +  KEAAD SL+          +ELPPT P+RLGLALNFSVFYYEIL+SPE ACHLAKQ FDEAI+ELDSL+EESYKDSTLIMQLLRDNLTLWTSD       QS  +E  A +    +EH E K
Sbjct:  107 KHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEY---NQSAKEEAPAAAAASENEHPEPK 261          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.606e-51
Identity = 100/139 (71.94%), Postives = 115/139 (82.73%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K D
Sbjct:  114 LIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKED 252          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 2.740e-51
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            L+P+S +G+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +E  E+ K
Sbjct:  117 LVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIK 253          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAE 439
            LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K  +   E
Sbjct:  110 LIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKETKTDNE 253          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51
Identity = 99/138 (71.74%), Postives = 113/138 (81.88%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            HLIPS++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +E G++ K
Sbjct:  109 HLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 4.673e-51
Identity = 98/138 (71.01%), Postives = 116/138 (84.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            +LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  108 NLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 245          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 6.104e-51
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LA +AFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++GG++ K
Sbjct:  114 LIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIK 250          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 6.104e-51
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 418
            LIP++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++  ++ K
Sbjct:  111 LIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIK 247          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14336_ORYSJ7.210e-5271.7414-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14334_ORYSJ7.210e-5267.7914-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
RAD25_SCHPO1.606e-5167.09DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433C_TOBAC1.606e-5171.9414-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14334_ARATH2.740e-5171.5314-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
1433B_TOBAC4.673e-5168.7514-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14333_ARATH4.673e-5171.7414-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_SOLLC4.673e-5171.0114-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
1433_OENEH6.104e-5171.5314-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14332_ARATH6.104e-5170.8014-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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