DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:410..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.273e-48
Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 409
            HLIPS+T+ ES VFY KMKGDY+RYLAEFK  D+RK AA+ ++           ++L PTHPIRLGLALNFSVFYYEILNS E+AC +AKQAF+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  113 HLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.273e-48
Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 409
            ++LIPS+++GES VFY KMKGDYYRYLAEFK  ++RKEAA+ ++           +EL PTHPIRLGLALNFSVFYYEILN+ E+AC +AKQAF+EAIAELD++ EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  113 QYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 248          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.171e-48
Identity = 94/135 (69.63%), Postives = 111/135 (82.22%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQ 412
            L+P+++SG+S VFY KMKGDY+RYLAEFK    RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAF EAIAELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +E  ++
Sbjct:   67 LVPAASSGDSKVFYLKMKGDYHRYLAEFKTGAQRKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFVEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDEAADE 201          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.171e-48
Identity = 94/136 (69.12%), Postives = 112/136 (82.35%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 409
            ++LIPS+ +GES VFY KMKGDYYRYLAEFK  ++RKEAA+ ++           +EL PTHPIRLGLALN+SVFYYEILN+ E+AC +AKQAF+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  113 QYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 248          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.249e-48
Identity = 98/146 (67.12%), Postives = 113/146 (77.40%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEG----GEQSKGDEVQ 433
            LI ++ +G+S VFY KMKGDYYRYLAEFK   +RKEAA+++L            EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAEL +L EESYKDSTLIMQL  DNLTLWTSD+ ++G     E SK +E Q
Sbjct:  110 LIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDSTLIMQLFCDNLTLWTSDMQDDGTDEIKEPSKAEEQQ 255          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 8.249e-48
Identity = 91/132 (68.94%), Postives = 110/132 (83.33%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 400
            +L+PS+T+ ES VFY KMKGDYYRYLAEFK  D+RK+AA+ ++           ++LPPTHPIRLGLALNFSVFY+EILNS ++AC +AKQAF+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD  ++
Sbjct:  117 NLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQ 248          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.838e-47
Identity = 94/128 (73.44%), Postives = 107/128 (83.59%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            HLIP +++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNS +RAC+LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  111 HLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433_FUCVE (14-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.400e-47
Identity = 98/140 (70.00%), Postives = 112/140 (80.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTL-IMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            LIP+STS E  VFYYKMKGDY+RYLAEF+ AD+RK +A  +L            +LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTL IMQLLRDNLTLWTSD  E   E++ G+
Sbjct:  105 LIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSDQGE--AEEAPGN 242          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.400e-47
Identity = 91/135 (67.41%), Postives = 110/135 (81.48%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 409
            HLIPS+ + ES VFY KMKGDY+RY+AEFK  D+RK AA+ ++           +++ PTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  113 HLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.347e-47
Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14338_ARATH1.273e-4870.3714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14331_SOLLC1.273e-4869.1214-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433_SPIOL2.171e-4869.6314-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
1433D_TOBAC2.171e-4869.1214-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
1433A_TOBAC8.249e-4867.1214-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14310_SOLLC8.249e-4868.9414-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
1433E_TOBAC1.838e-4773.4414-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433_FUCVE2.400e-4770.0014-3-3-like protein OS=Fucus vesiculosus PE=2 SV=1[more]
14336_ARATH2.400e-4767.4114-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
1433Z_PONAB5.347e-4767.1414-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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