DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:410..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.347e-47
Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.347e-47
Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.121e-47
Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.121e-47
Identity = 94/140 (67.14%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 9.121e-47
Identity = 91/142 (64.08%), Postives = 109/142 (76.76%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            +HLIP +++ ES VFY KMKGDYYRYLAE    + R    + S K          +++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +G E ++G +
Sbjct:  105 KHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 246          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 94/140 (67.14%), Postives = 104/140 (74.29%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+ +  ES VFY KMKGDYYRYLAE    DD+K   D S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNRSQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46
Identity = 93/140 (66.43%), Postives = 105/140 (75.00%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP+++  ES VFY KMKGDYYRYLAE    DD+K   + S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD   +  E  +G E
Sbjct:  105 LIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVEQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.032e-46
Identity = 89/127 (70.08%), Postives = 104/127 (81.89%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            LIP +T+ ES VFY KMKGDYYRYLAE    D+R++  + S +          +++ PTHPIRLGLALNFSVFYYEILN+P+RACHLAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD
Sbjct:   74 LIPKATTAESKVFYLKMKGDYYRYLAEVATGDERQKVIEESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 200          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.527e-46
Identity = 91/139 (65.47%), Postives = 106/139 (76.26%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            L+P++T  ES VFY KMKGDYYRYL+E    D ++E   +S +          SE+ PTHPIRLGLALNFSVFYYEILNSP++AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   E  +  +GD
Sbjct:  105 LVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVANSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSETQGEEADNVEGD 243          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46
Identity = 92/139 (66.19%), Postives = 105/139 (75.54%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            L+P++T  ES VFY KMKGDYYRYL+E    D ++E    S +          SE+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   E  +  +GD
Sbjct:  105 LVPNATPPESKVFYLKMKGDYYRYLSEVASGDSKQETVASSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNVEGD 243          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_HUMAN5.347e-4767.1414-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_BOVIN5.347e-4767.1414-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]
1433Z_RAT9.121e-4767.1414-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_MOUSE9.121e-4767.1414-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_BOMMO9.121e-4764.0814-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]
1433Z_SHEEP1.556e-4667.1414-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
1433Z_CHICK1.556e-4666.4314-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
14332_SCHMA2.032e-4670.0814-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
143BB_XENLA4.527e-4665.4714-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]
143BA_XENLA5.912e-4666.1914-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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