DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:410..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.247e-45
Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            ++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  105 KYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.247e-45
Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            ++LIP++T  ES VFY KMKGDY+RYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  105 KYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 245          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.934e-45
Identity = 90/140 (64.29%), Postives = 104/140 (74.29%), Query Frame = 2
Query:    8 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            LIP +++ ES VFY KMKGDYYRYLAE    + R    D S             ++ PTHPIRLGLALNFSVFYYEILNSP++AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +G E  +G +
Sbjct:  108 LIPKASNPESKVFYLKMKGDYYRYLAEVATGETRNTVVDDSQAAYQDAFEISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPQEGGD 247          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433T_XENLA (14-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            ++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  103 KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433T_RAT (14-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            ++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  103 KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433T_RABIT (14-3-3 protein theta OS=Oryctolagus cuniculus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            ++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  103 KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433T_MOUSE (14-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            ++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  103 KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.536e-45
Identity = 92/142 (64.79%), Postives = 108/142 (76.06%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 427
            ++LI ++T+ ES VFY KMKGDY+RYLAE    DDRK+  ++S             E+ PTHPIRLGLALNFSVFYYEILN+PE AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  103 KYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            +LI ++T  ES VFY KMKGDYYRYL+E    D +K   ++S +           ++ PTHPIRLGLALNFSVFYYEILNSPE+AC LAK AFDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  104 YLIANATQAESKVFYLKMKGDYYRYLSEVASGDSKKTTVENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45
Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 424
            ++LI ++T  ES VFY KMKGDYYRYL+E    D+++    +S +           E+ PTHPIRLGLALNFSVFYYEILNSPE+AC+LAK AFDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  103 KYLIVNATQPESKVFYLKMKGDYYRYLSEVASGDNKQTTVANSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACNLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_HUMAN2.247e-4563.1214-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN2.247e-4563.1214-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433Z_AEDAE2.934e-4564.2914-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta... [more]
1433T_XENLA6.536e-4564.7914-3-3 protein theta OS=Xenopus laevis GN=ywhaq PE... [more]
1433T_RAT6.536e-4564.7914-3-3 protein theta OS=Rattus norvegicus GN=Ywhaq... [more]
1433T_RABIT6.536e-4564.7914-3-3 protein theta OS=Oryctolagus cuniculus GN=Y... [more]
1433T_MOUSE6.536e-4564.7914-3-3 protein theta OS=Mus musculus GN=Ywhaq PE=1... [more]
1433T_CHICK6.536e-4564.7914-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
143B1_ONCMY8.537e-4562.8614-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
1433B_CHICK8.537e-4563.1214-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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