CN186126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 55/174 (31.61%), Postives = 98/174 (56.32%), Query Frame = -3 Query: 289 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWS--NASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRS 804 +NKK S +LG T IW +C L++ + + +WS +S I PP I ++ I E L + + + I + + +I+SG+D + + LW++S+VG++ + LTL YIVFV L T+P++YE+YE+ + + K+ ++KK F++KV++KIP++ Sbjct: 38 KNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLY----DISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPKA 207
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19 Identity = 49/177 (27.68%), Postives = 89/177 (50.28%), Query Frame = -3 Query: 277 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSL-KDK 804 R + +S GV+ +T W+ + L++ + + F+ + S F N+ +PE+ + EE V A++ R ++N + ++ G D + F V+ LW++S +GS+ + TL YI +L T+P +Y KY+ +VD + Y + D V+S++ SL KDK Sbjct: 48 RRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDK 224
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.427e-17 Identity = 55/178 (30.90%), Postives = 88/178 (49.44%), Query Frame = -3 Query: 271 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLKDKKK 804 RN+ + +L +T W V + L++ +A+ FLW+ ++T +N+ P +P + IPEE + A LR IN + +I R+ + L V LW +S VG+ N LTL YI +L + P++YEKY+D +D EK + K F + K P + +KK Sbjct: 29 RNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID---EKVNSTSK-----FVRNISRKFPLPINKEKK 198
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17 Identity = 57/173 (32.95%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 283 KISAGV-LGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSN-ASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSLK 795 KI++G+ L AT W L+C L++ + +LFLW+ F + PP E+ P+ P+ L S + + +L EIA G+D K FL I + ++ +GS+ + LT+ YI V T+PV+Y ++++ +DSF K E VF +V+SKIPR+ K Sbjct: 22 KINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGHLL----MLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVF-KQVVSKIPRAPK 189
BLAST of CN186126 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 43/143 (30.07%), Postives = 78/143 (54.55%), Query Frame = -3 Query: 376 RNKKISAGVLGGATAIWVXXXXXXXXXXXLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRV 804 R K +S G++ A W+ L+ L++ L++LFLWS +++ +N+ P +PE I E + + LR +N+ + +IA RD + + V L+++S++GS +F TL + +++ TVP YE+YED + Sbjct: 31 RKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173 The following BLAST results are available for this feature:
BLAST of CN186126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186126 ID=CN186126; Name=CN186126; organism=Citrus sinensis; type=EST; length=806bpback to top |