CN186121

Overview
NameCN186121
Unique NameCN186121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:64..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.690e-46
Identity = 93/160 (58.13%), Postives = 119/160 (74.38%), Query Frame = 3
Query:  249 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG------RVGGVVTNW 707
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WLGGQLFSAMV+RKPAH+FL EL I Y+++ +YVV+KHAALF ST++SK+L  PNVKLFNA   EDL+ +         V GVVTNW
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21
Identity = 53/144 (36.81%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            ++E  ++R +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV+  A   LDE GI Y+E +    +  A    +TI SK++ +  VK+FN +  EDL++K  RV G+V NW
Sbjct:    2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIKDNRVSGIVINW 143          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            ++E  +SR +   Y  D++     D    GAG +G+   Y L+K    ++AI E+ +S GGG W G   F+ +VV++ A   LDE G+DY +  N + +  +    ST+ SK + +   K+FN V  EDL+VK GRV G+V NW
Sbjct:    1 MREIEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVKDGRVSGLVINW 142          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            +K+ ++SR +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN V  EDL+VK  RV G+V NW
Sbjct:    2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVKDDRVSGIVINW 143          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            ++E  +SR +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN +  EDL+VK  RV G+V NW
Sbjct:    2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVKDNRVSGIVINW 143          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20
Identity = 50/144 (34.72%), Postives = 88/144 (61.11%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W GG +F+ +V+ K    FL E+ I+Y+ +++++V+  +  F S ++ +   +    +FN V+ ED+ V+ GRV GVV NW
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDVAVQNGRVCGVVVNW 143          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17
Identity = 48/148 (32.43%), Postives = 83/148 (56.08%), Query Frame = 3
Query:  264 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            K D IK   +SR +   YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W GG +F+ +VV+      LDE GI  +  D    +  +   TST+ S+   +  +K+FN ++ ED++++   + G+V NW
Sbjct:    2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR-ACQAGLKIFNLMSIEDVMIRDEGITGLVLNW 144          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNW 707
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W GG +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNW 145          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 707
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W GG +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINW 143          
BLAST of CN186121 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 3
Query:  276 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNW 707
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E ++   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINW 145          
The following BLAST results are available for this feature:
BLAST of CN186121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
THI4_YEAST3.690e-4658.13Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]
THI4_PYRHO5.366e-2136.81Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRKO9.153e-2136.81Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRFU1.195e-2037.50Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB1.561e-2037.50Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_THEMA5.933e-2034.72Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_METTH1.616e-1732.43Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_METMJ3.369e-1532.19Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_FERNB2.184e-1430.56Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_METAC3.725e-1431.76Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186121 ID=CN186121; Name=CN186121; organism=Citrus sinensis; type=EST; length=707bp
CGTTATCAAATCAAATTACTTCTCATTATCAAACTTCTAACCTTCAGGGG
AAGGAGGGGTAAAAAAAAAAAACCATGGCAGCCATGGCTTCTACAGCTTT
CGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTTTC
ATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCT
TCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGA
CTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTG
AAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTGAT
GTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCT
CAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCC
CCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTG
CGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGA
GCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTA
TAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTG
GCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGAC
CAACTGG
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