CN186120

Overview
NameCN186120
Unique NameCN186120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:808..1579. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = -3
Query:  462 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSI-----GMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 770
            DP  + A+VV+   GHD        K++        G+I E P   AL     E  +V  TREV PG+IV GM    +   PRMGP FG M++SG+KAA +AL+ L Q
Sbjct:  156 DPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAAL----GEKIVVDATREVYPGLIVAGMAATTVAAGPRMGPIFGGMLLSGEKAASIALEKLAQ 259          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = -3
Query:  462 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 770
            DP  + AK V+ S GHD    +T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A L L+ L +
Sbjct:  161 DPITISAKYVIDSTGHDASVVSTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLFVCGMTANAYHAGYRMGAIFGGMYLSGKKCAELILEKLNK 261          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = -3
Query:  462 DPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 770
            DP  +E+ +VV S GHD          G   A G++     + GM             + PG  ++ ++ +ED +V  T  V PG++ TGM VA ++G PRMGPTFGAM++SG++ A   L  LG+
Sbjct:  167 DPVAVESDLVVDSTGHDAVVISKLSERGVLNAPGIEHANEHNTGMDNTADDEYGAPGHDSPGHDSMWVSRSEDQVVEHTGVVHPGVVATGMAVATVEGLPRMGPTFGAMLLSGKRGAQACLNELGR 292          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+  TGM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGKAVAGEITKDL 260          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++  +  E+++ R TREV PG+ V GM         RMG  FG M +SG+K A L L+ L
Sbjct:  161 DPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CN186120 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = -3
Query:  468 DPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 770
            DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  162 DPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of CN186120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
THI4_METTP2.143e-1340.74Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METVS3.655e-1338.83Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_HALWD4.773e-1335.71Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_SULSO8.142e-1338.61Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METMP1.063e-1240.59Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULIY1.814e-1237.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM1.814e-1237.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.814e-1237.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.814e-1237.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.814e-1237.62Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186120 ID=CN186120; Name=CN186120; organism=Citrus sinensis; type=EST; length=772bp
TTTTTTTTTTTTTGATCTTATCACATCAGCACTTTCCCATTGCCTTTTGG
CTCAAGTTATAAACATACAAAGCAAAGAAAAGGGCCCTGCCCAAGGGCAG
TCTTACACATAACACAGATAACAAGGACTAGATACGCAACTGCAAATTCA
CCTCCGAAAAACTCACAACGGTTTCTTACAAGAGGAGAAAGAAATTAAAA
TTAAAGGTTCGATGATGGACCGGAAACAAACACTTTATTCACAAAACCTC
ACAACATTATCTCATTATTCGCATCAACCATCCATCACAACCACCTAAAT
ACAACTACTTTTTTGCCAGAGTTTATTTGCATGCACACAGCTGATGAGTG
ATGATGCCTGTTATTACCAAATTAAGCATCAGCAGTCTCAGCAGAATCAG
CTGCAGCTAAGATCAGCTCAGGGTGAACGCCTCCCACATATGTACCGTCT
AATGCATTCGGCTGGCCCAGTGACTTCAACGCCAAATGCGCAGCCTTCTG
CCCCGATATCATCATTGCTCCAAATGTTGGCCCCATTCGAGGAGCACCAT
CAATCTCGGCAACTTCCATGCCGGTAACTATCATACCAGGCACAACCTCC
CTGGTCAGCCTCACAATAGCATCTTCTGCAGAGTTCATGTCCAGTGCCTT
CATTCCAGGCACTTCCTCAATCATTCCGATACTCTTCAACCTCTTTACTC
CAGTGGCCCCAAAAGGCCCATCATGGCCACAAGAGCTCACAACCACCTTC
GCTTCCATTACATTGGGATCCA
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