DC900174

Overview
NameDC900174
Unique NameDC900174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8201 contig Csv1_Contig8201:73..521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CANAL (Orotidine 5'-phosphate decarboxylase OS=Candida albicans GN=URA3 PE=3 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 9.864e-29
Identity = 64/148 (43.24%), Postives = 95/148 (64.19%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSK-LRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD-----XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF++M  K++NLC + DV T  E L++ +K+GP +CL+KTH+DI+ DF+ +   + L  ++ KH F+IFEDRKFADIGNTV  Q  GG++ I  WADI NAH ++G G+V+                     AE+SS G+LA G++
Sbjct:   21 QRLFRLMESKKTNLCASIDVDTTKEFLELIDKLGPYVCLIKTHIDIINDFSYESTIEPLLELSRKHQFMIFEDRKFADIGNTVKKQYIGGVYKISSWADITNAHGVTGNGVVEGLKQGAKETTTNQEPRGLLMLAELSSVGSLAYGEY 168          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_SOLCC (Orotidine 5'-phosphate decarboxylase OS=Solorina crocea GN=PYRG PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.288e-28
Identity = 58/112 (51.79%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD 342
            RKLF++   K+SN+ ++AD+ T  ELL++A+ +GP I +LKTH+DI+ DF  +    L++++EKHNFLIFEDRKF DIGNTV  Q  GG   I +WA ++NA I++G GIV+
Sbjct:   22 RKLFEIAEAKKSNVVVSADLTTTKELLELADHLGPYIAVLKTHIDIVSDFNKETVFGLKSLSEKHNFLIFEDRKFVDIGNTVQKQYHGGALRISEWAHLVNASILAGDGIVE 133          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CANTR (Orotidine 5'-phosphate decarboxylase OS=Candida tropicalis GN=URA3 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.288e-28
Identity = 67/147 (45.58%), Postives = 96/147 (65.31%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAI--AEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD---XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LFQ+M  K++NLC + DV T  E L + +K+GP ICL+KTH+DI+ DF+ + G+ L  I  ++KHNF+IFEDRKFADIGNTV +Q   G++ I  W+DI NAH ++G G V+                   AE+SS G+LA G++
Sbjct:   20 QRLFQLMESKKTNLCASIDVPTTKEFLSLIDKLGPFICLVKTHIDIISDFSYE-GTILPLIELSKKHNFMIFEDRKFADIGNTVKLQYTSGVYKISSWSDITNAHGVTGKGGVEGLKKGADETTNEPRGLLMLAELSSKGSLAYGEY 165          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PENCH (Orotidine 5'-phosphate decarboxylase OS=Penicillium chrysogenum GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.870e-28
Identity = 71/154 (46.10%), Postives = 93/154 (60.39%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEK---VGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDFRAA 441
            RKLFQV  +K+SN+ ++ADV T  ELL +A+    +GP I ++KTH+DIL DF+ +    L A+A+KHNFLIFEDRKF DIGNTV  Q   G   I +WA IIN  I+ G GIV+                      AEM+S G+LA G + +A
Sbjct:   22 RKLFQVAEEKKSNVTVSADVTTTKELLDLADPSTGLGPYIAVIKTHIDILSDFSQETIDGLNALAQKHNFLIFEDRKFIDIGNTVQKQYHNGTLRISEWAHIINCSILPGEGIVEALAQTAQATDFPYGSERGLLILAEMTSKGSLATGAYTSA 175          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_ASPNG (Orotidine 5'-phosphate decarboxylase OS=Aspergillus niger GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.870e-28
Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF++   K++N+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +    L+A+A+KHNFLIFEDRKF DIGNTV  Q   G   I +WA IIN  I+ G GIV+                      AEM+S G+LA G +
Sbjct:   22 KRLFEIAEAKKTNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSDETIEGLKALAQKHNFLIFEDRKFIDIGNTVQKQYHRGTLRISEWAHIINCSILPGEGIVEALAQTASAPDFSYGPERGLLILAEMTSKGSLATGQY 169          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_ASPAW (Orotidine 5'-phosphate decarboxylase OS=Aspergillus awamori GN=pyrG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.870e-28
Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF++   K++N+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +    L+A+A+KHNFLIFEDRKF DIGNTV  Q   G   I +WA IIN  I+ G GIV+                      AEM+S G+LA G +
Sbjct:   22 KRLFEIAEAKKTNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSDETIEGLKALAQKHNFLIFEDRKFIDIGNTVQKQYHRGTLRISEWAHIINCSILPGEGIVEALAQTASAPDFGYGPERGLLILAEMTSKGSLATGQY 169          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_SACFI (Orotidine 5'-phosphate decarboxylase OS=Saccharomycopsis fibuligera GN=URA3 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.091e-27
Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS-KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            +KLF ++ +K++NLC + DV + ++ L + EK+GP IC++KTH+DIL DF+ +     L  + +K NFLIFEDRKFADIGNTV +Q   GI+ I  WADI NAH + G GIV                    AE+SS G++A G++
Sbjct:   19 KKLFTIIEEKKTNLCASVDVRSTSQFLDLIEKLGPYICVVKTHIDILDDFSYEKTIVPLLELKKKFNFLIFEDRKFADIGNTVKLQYSAGIYKISSWADISNAHGVPGQGIVAGLKQAAQETTQEPRGLLMLAELSSKGSIATGEY 164          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYR5_NAEGR (Uridine 5'-monophosphate synthase OS=Naegleria gruberi GN=UMP PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.860e-27
Identity = 57/109 (52.29%), Postives = 82/109 (75.23%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPD--FGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISG 327
            +KLF++M +K++NLC+AAD+ +  +LL++A++ GPEIC+LKTH+D L D  PD  F  +L+ +A+KHNFLIFEDRK ADIG  V  Q   G F I  W+D+ N+H++SG
Sbjct:  248 KKLFKLMEEKQTNLCVAADITSKDDLLKLADETGPEICMLKTHIDTLDD-QPDEQFTQQLKELAKKHNFLIFEDRKLADIGQVVKQQYARGPFKIAQWSDLCNSHLVSG 355          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_ASPKA (Orotidine 5'-phosphate decarboxylase OS=Aspergillus kawachi GN=pyrG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.173e-27
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF++   K++N+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +    L+A+A+KH FLIFEDRKF DIGNTV  Q   G   I +WA IIN  I+ G GIV+                      AEM+S G+LA G +
Sbjct:   22 KRLFEIAEAKKTNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSDETIEGLKALAQKHIFLIFEDRKFIDIGNTVQKQYHRGTLRISEWAHIINCSILPGEGIVEALAQTASAPDFGYGPERGLLILAEMTSKGSLATGQY 169          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_YARLI (Orotidine 5'-phosphate decarboxylase OS=Yarrowia lipolytica GN=URA3 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.575e-26
Identity = 53/111 (47.75%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFT-PDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV 339
            ++ +++  K++NLC + DV T  EL+++A+KVGP +C++KTH+DI+ DFT       L+ +A KH F +FEDRKFADIGNTV  Q + G++ I +W+DI NAH + G GI+
Sbjct:   18 RVLKLVAAKKTNLCASLDVTTTKELIELADKVGPYVCMIKTHIDIIDDFTYAGTVLPLKELALKHGFFLFEDRKFADIGNTVKHQYKNGVYRIAEWSDITNAHGVPGTGII 128          
The following BLAST results are available for this feature:
BLAST of DC900174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_CANAL9.864e-2943.24Orotidine 5'-phosphate decarboxylase OS=Candida al... [more]
PYRF_SOLCC1.288e-2851.79Orotidine 5'-phosphate decarboxylase OS=Solorina c... [more]
PYRF_CANTR1.288e-2845.58Orotidine 5'-phosphate decarboxylase OS=Candida tr... [more]
PYRF_PENCH2.870e-2846.10Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_ASPNG2.870e-2843.92Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_ASPAW2.870e-2843.92Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_SACFI1.091e-2744.52Orotidine 5'-phosphate decarboxylase OS=Saccharomy... [more]
PYR5_NAEGR1.860e-2752.29Uridine 5'-monophosphate synthase OS=Naegleria gru... [more]
PYRF_ASPKA3.173e-2743.24Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_YARLI1.575e-2647.75Orotidine 5'-phosphate decarboxylase OS=Yarrowia l... [more]

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Properties
Property NameValue
Genbank descriptionDC900174 VSS Citrus sinensis cDNA clone VS28201 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900174 ID=DC900174; Name=DC900174; organism=Citrus sinensis; type=EST; length=450bp
ACTGGGAGAAAATTGTTTCAAGTGATGGTGAAGAAGGAGAGTAATTTGTG
TTTGGCTGCTGATGTTGCCACTGCTGCTGAGTTGCTTCAAATTGCCGAGA
AGGTTGGACCAGAGATCTGCTTGTTGAAAACCCATGTCGATATATTGCCT
GATTTCACCCCAGATTTTGGTTCCAAACTTCGTGCGATTGCAGAAAAGCA
TAACTTCCTAATTTTTGAAGATCGCAAGTTTGCGGACATTGGTAACACTG
TGACCATGCAGGCTGAAGGTGGTATATTTTGTATATTGGATTGGGCCGAT
ATAATAAATGCTCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAA
ATTAAAGGGATTGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGA
GCTCAGCTGGTAACCTAGCAAAGGGAGACTTCAGAGCAGCTGGAAATGCG
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