DC900171

Overview
NameDC900171
Unique NameDC900171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:85..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11
Identity = 52/194 (26.80%), Postives = 81/194 (41.75%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI 599
            K  + +E G  L  +++ V  P+ NE+ + + ++ +CHTD++ W  KG  PL    P + GHE  G+V ++GE V   + GD   +    G C  C +C     + C       D     +DG                  +F +Y        AKI     L +V  + C   T + A +  A  K G  VAI
Sbjct:   10 KGVIFYENGGELQYKDIPVPKPKANELLINVKYSGVCHTDLHAW--KGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCP----EADLSGYTHDG------------------SFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKA-LKSANLKAGDWVAI 178          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: YJJN_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjjN OS=Escherichia coli (strain K12) GN=yjjN PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.363e-11
Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 3
Query:   57 KPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRI 353
            K LV ++ E+  P  NE  +KI    +C TD++ W        +PR+ GHE  G +  +G+ + DL+ G  V  +    C++CP C S  +N C+ + +
Sbjct:   13 KELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISV 111          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.363e-11
Identity = 52/194 (26.80%), Postives = 81/194 (41.75%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI 599
            K  + +E G  L  +++ V  P+ NE+ + + ++ +CHTD++ W+  G  PL    P + GHE  GIV ++GE VT  + GD+  +    G C  C  C       C       D     +DG                  +F +Y        A+I     L +V  + C   T + A +  A  K G  VAI
Sbjct:    8 KGVIFYEHGGELQYKDIPVPKPKPNELLINVKYSGVCHTDLHAWQ--GDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCP----KADLSGYTHDG------------------SFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKA-LKSAHIKAGDWVAI 176          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH2_KLUMA (Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus GN=ADH2 PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.392e-11
Identity = 54/195 (27.69%), Postives = 83/195 (42.56%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCH-SEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI 599
            K  + +E G  L  +++ V  P+ NE+ + + ++ +CHTD++ W  KG  PL    P + GHE  G+V ++G+ V   + GD   +    G C  C  C  S ESN  D      D     +DG                  +F +Y        A I     L +V  + C   T + A +  A+ K G  VAI
Sbjct:    8 KGVIFYENGGQLYYKDIPVPKPKSNELLINVKYSGVCHTDLHAW--KGDWPLDTKLPLVGGHEGAGVVVAMGDNVKGWKIGDLAGIKWLNGSCMNCEECELSNESNCPD-----ADLSGYTHDG------------------SFQQYATADAVQAAHIPAGTDLAQVAPILCAGVTVYKA-LKTAEMKAGDWVAI 176          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 52/194 (26.80%), Postives = 82/194 (42.27%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL---FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI 599
            KA +    G  L  +++ V  P+ NE+ + + ++ +CHTD++ W  KG  PL    P + GHE  G+V ++GE V   + GD+  +    G C  C +C S     C       D     +DG                  +F +Y        A+I     L  V  + C   T + A +  A+ + GQ VAI
Sbjct:    8 KAVIFETNGGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAW--KGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNC----AEADLSGYTHDG------------------SFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKA-LKTAELEAGQWVAI 176          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH2_CAEEL (Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 32/98 (32.65%), Postives = 52/98 (53.06%), Query Frame = 3
Query:   54 GKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQ-TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCD 341
            G PL + +V V  PQ+NE+ +KI ++ +CH+D++ WE   +   + P I GHE  G V ++G  V     GD   + +    C  C +C +    +CD
Sbjct:   19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCD 116          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 51/194 (26.29%), Postives = 78/194 (40.21%), Query Frame = 3
Query:   30 KAAVAWEAGKP---LVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAI 599
            KAAV W A      L          + ++V +K+L+  +CHTD++  +      ++P + GHE  G+V  VG GVT  + GD V +  F G C+ C  C     N C  + I ++               GK          FS+  V +   V ++    PLD    L C   T +   V       G+ V +
Sbjct:   81 KAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSN---------------GKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGV 259          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 48/177 (27.12%), Postives = 70/177 (39.55%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 554
            KA V +E    L  ++V V  P+ NE+ + + ++ +CH+D++ W       L FP I GHE  G+V  +G  V   + GD   +    G C  C +C     + C  L           DG             F    TF EY        A I P   L +V  + C   T + A
Sbjct:   11 KAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYL-----------DGTG-----------FTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKA 165          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11
Identity = 48/177 (27.12%), Postives = 70/177 (39.55%), Query Frame = 3
Query:   30 KAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPL-FPRIFGHEAGGIVESVGEGVTDLQPGDHV-LPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGA 554
            KA V +E    L  ++V V  P+ NE+ + + ++ +CH+D++ W       L FP I GHE  G+V  +G  V   + GD   +    G C  C +C     + C  L           DG             F    TF EY        A I P   L +V  + C   T + A
Sbjct:   11 KAIVFYETDGKLEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYL-----------DGTG-----------FTHDGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKA 165          
The following BLAST results are available for this feature:
BLAST of DC900171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
ADH1_KLULA2.575e-1126.80Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
YJJN_ECOLI3.363e-1131.31Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH1_KLUMA3.363e-1126.80Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH2_KLUMA4.392e-1127.69Alcohol dehydrogenase 2 OS=Kluyveromyces marxianus... [more]
ADH2_CANAL5.737e-1126.80Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH2_CAEEL5.737e-1132.65Alcohol dehydrogenase 2 OS=Caenorhabditis elegans ... [more]
CAD8B_ORYSJ7.492e-1126.29Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
ADH5_YEAST9.785e-1127.12Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS9.785e-1127.12Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]

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Properties
Property NameValue
Genbank descriptionDC900171 VSS Citrus sinensis cDNA clone VS27V94 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900171 ID=DC900171; Name=DC900171; organism=Citrus sinensis; type=EST; length=656bp
CTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAG
GCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAA
AAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATG
TTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTT
GGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGA
TCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGG
AATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGG
ATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTC
GATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTG
AATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCC
CCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGG
GGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTT
TTGGATTGGGTGCAGNTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCA
GGGGCT
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