DC900171

Overview
NameDC900171
Unique NameDC900171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:85..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.218e-61
Identity = 113/217 (52.07%), Postives = 148/217 (68.20%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            TAGQVI+CKAAVAWEAGKPL +EEVEVAPP+  EVR+K++ T +CHTD Y          FP I GHE  G+VESVGEGVT  + GD V+P++  +C EC  C + ++N+C  +R+   RG+M  D  SRF+ KGK ++HF+GTSTFSEYTV     +A ++P APLDKVC+L CGISTG+GA +N AK + G + A+F             +V+GA
Sbjct:    2 TAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGA 217          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 235.728 bits (600), Expect = 1.591e-61
Identity = 117/216 (54.17%), Postives = 149/216 (68.98%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA VN AK + G   A+F             +V+GA
Sbjct:    2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 216          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 234.958 bits (598), Expect = 2.713e-61
Identity = 113/198 (57.07%), Postives = 146/198 (73.74%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI  T++CHTD Y          FP I GHE  GIVESVGEGVT+L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA +N AK + G + A+F
Sbjct:    2 ANKVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVF 198          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.544e-61
Identity = 116/216 (53.70%), Postives = 150/216 (69.44%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            A QVI+CKAAVAWEAGKPL IEEVEVAPP+ +EVR+KI+ T++CHTD Y          +P I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA +N AK + G + A+F             +++GA
Sbjct:    2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGA 216          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.628e-61
Identity = 113/217 (52.07%), Postives = 147/217 (67.74%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            TAG+VI+CKAAVAWE GKPL IEEVEVAPP  +EVR+K+  T +CHTD Y         LFP I GHE  G VESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +RI   +G ++ D  SRF+ KGK ++HF+GTSTFSEYTV     +AK+N  AP+DKVC+L CGISTG+GA +N AK + G + A+F             +V+GA
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGA 218          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61
Identity = 114/216 (52.78%), Postives = 148/216 (68.52%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            A  VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +R+   +GVM  DG SRF+ KGK + HF+GTSTFSEYTV     + KIN +APLDKVC+L CG+STG+GA +N AK + G + A+F             +V+GA
Sbjct:    1 ASGVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGA 215          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61
Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            + +VI+CKAAVAWEAGKP+ IEEVEVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R    +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CG+STG+GA VN AK + G + AIF             +V+GA
Sbjct:    2 SAEVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGA 216          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.759e-60
Identity = 108/199 (54.27%), Postives = 144/199 (72.36%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAGQVI CKAAVAW A  PL IE ++VAPP+ +EVR+KIL+T++CHTD Y  +      LFP + GHE  GIVESVGEGVT   PGDHV+P++  +CKEC +C + ++N+C  +RI+   G M  DG SRF+  GK ++HF+G STFSEYTV     + K+NP APL+KV +L CGISTG+GA +N  K ++G +VA++
Sbjct:    4 TAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVW 201          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.117e-60
Identity = 112/199 (56.28%), Postives = 140/199 (70.35%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T G+VI CKAAVAWEA KPLVIE++EV PPQK EVR+KIL+T +CHTD Y         +FP I GHE GGIVES+GEGVT ++ GDHV+P++  EC  C  C S ++N+C  +RI   +G M  DG +RF  KGK I+HF+GTSTFS+YTV        +   APLDKVC+L CGI+TGFGA    AK ++G +VAIF
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQM-PDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIF 200          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.389e-59
Identity = 106/199 (53.27%), Postives = 141/199 (70.85%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T G+ IRC+AAVAWEAGKPL +EEVEVAPPQ  EVR+KI+ T +CHTD Y         +FP + GHE  GIVESVGEGVT  + GD V+P++  +C EC  C + ++N+C  +R+   +G+M N G SRFS  G+ ++HF+G+STFSEYTV     +AK++  APLDKVC+L C ISTG+GA +N AK + G + A+F
Sbjct:    2 TVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPN-GTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVF 199          
The following BLAST results are available for this feature:
BLAST of DC900171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
ADHH_GADMO1.218e-6152.07Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_HUMAN1.591e-6154.17Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_RABIT2.713e-6157.07Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_BOVIN3.544e-6153.70Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_SPAAU4.628e-6152.07Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_UROHA6.044e-6152.78Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HORSE6.044e-6153.70Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_CAEEL1.759e-6054.27Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHX_DICDI5.117e-6056.28Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHL_GADMO7.389e-5953.27Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]

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Properties
Property NameValue
Genbank descriptionDC900171 VSS Citrus sinensis cDNA clone VS27V94 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900171 ID=DC900171; Name=DC900171; organism=Citrus sinensis; type=EST; length=656bp
CTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAG
GCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAA
AAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATG
TTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTT
GGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGA
TCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGG
AATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGG
ATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTC
GATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTG
AATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCC
CCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGG
GGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTT
TTGGATTGGGTGCAGNTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCA
GGGGCT
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