DC900171

Overview
NameDC900171
Unique NameDC900171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:85..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55
Identity = 104/199 (52.26%), Postives = 140/199 (70.35%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G+VESVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HF+GTSTF+EYTV H    AKI+ AAPL+KVC++ CG STG+GA +  AK + G + A+F
Sbjct:    2 TAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55
Identity = 103/199 (51.76%), Postives = 139/199 (69.85%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T G+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G++ESVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HFVGTSTF+EYTV H    AKI+ AAPL+KVC++ CG STG+GA +  AK + G + A+F
Sbjct:    3 TVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVF 200          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.473e-55
Identity = 106/200 (53.00%), Postives = 139/200 (69.50%), Query Frame = 3
Query:    3 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            GTAG+VI+CKAAV WE  +P  IEE+EVAPP+  EVR+KIL T +C TD +  +       FP I GHEA GIVES+GEGVT ++PGD V+P+F  +C+EC  C + + N+C    I T RGV+  DG +RF+ KGKP++HF+ TSTF+EYTV     VAKI+ AAP +KVC++ CG STG+GA V   K K G +  +F
Sbjct:    2 GTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGRGVLA-DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVF 198          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.104e-54
Identity = 104/199 (52.26%), Postives = 139/199 (69.85%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VI+CKAAV WE  KP  IE++EVAPP+ +EVR+K++ T +C +D +       TPL P + GHE  GIVES+GEGVT ++PGD V+P+F+ +C +C  C   ESN+C   +  T     + DG SRFS +GKPI+HF+ TSTFS+YTV     VAKI+ AAPLDKVC++ CG STG+G+ V VAK   G + A+F
Sbjct:    3 TAGKVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVF 200          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.442e-54
Identity = 103/199 (51.76%), Postives = 135/199 (67.84%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVIRCKAA+ W+ G P  IEEVEVAPP+  EVR+K++ T LC T++    +K    L+P I GHE  GIVES+GEGV+ ++PGD V+ +F  +C EC  C + E N C  ++    +  +++DG SRF+ KGK IYHF  TSTF EYTV     VAKI+  APL+KVC++SCG STGFGA +N AK   G + A+F
Sbjct:    3 TTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFC--IQFKQSKTQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 1.442e-54
Identity = 106/199 (53.27%), Postives = 137/199 (68.84%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++   +C +D +       TPL P I GHEA GIVE VGEGVT ++PGD V+P+FT +C +C  C + ESN C    ++  RG M  DG  RF+  GKPI+HF+G STFS+YTV     VAKI+ A+PL+KVC++ CG STG+G  V VAK   G + A+F
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEEVEVAPPKAHEVRIKMVAVGICRSDDHVVSGTLVTPL-PAILGHEAAGIVEGVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCFKNDLSNPRGTM-QDGTRRFTCGGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.460e-54
Identity = 103/199 (51.76%), Postives = 134/199 (67.34%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVIRCKAA+ W+ G P  IEEVEVAPP+  EVR+K++ T LC T++    +K    L+P I GHE  GIVES+GEGV+ ++PGD V+ +F  +C EC  C + E N C  ++       +++DG SRF+ KGK IYHF  TSTF EYTV     VAKI+  APL+KVC++SCG STGFGA +N AK   G + A+F
Sbjct:    3 TTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFC--IQFKQSETQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.460e-54
Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+   +C +C  C + ESN C    ++  +G +  DG SRF+ +GKPI+HF+G STFS+YTV     VAKI+ A+PL KVC++ CG STG+G+ VNVAK   G + A+F
Sbjct:    3 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAQEVRIKMVAVGICGTDDHVVSGTMVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLAVPQCGKCRICKNPESNYCLKNDVSNPQGTL-QDGTSRFTCRGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.212e-54
Identity = 106/199 (53.27%), Postives = 141/199 (70.85%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++   +C +D +        PL P I GHEA GIVES+GEGVT ++PGD V+P+F  +C +C  C   E N+C L  ++  RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG+G+ V VAK  +G + A+F
Sbjct:    3 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVF 198          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 9.347e-54
Identity = 104/197 (52.79%), Postives = 137/197 (69.54%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVA 596
            TAG+VI+C+AAV WE  KP  IEEVEVAPP+  EVR+KI+ T +C +D +       TPL P I GHEAGGIVES+GEGVT ++PGD V+P+F  +C +C  C   ESN+C    +   +G ++ DG SRF+ KGKPI+HF+G +TFSEYTV     V KI+ A+PL+KVC++ CG STG+G+ V V K  +G   A
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICA 197          
The following BLAST results are available for this feature:
BLAST of DC900171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
ADH1_COTJA4.956e-5552.26Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK4.956e-5551.76Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH7_HUMAN6.473e-5553.00Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_RAT1.104e-5452.26Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH6_HUMAN1.442e-5451.76Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADH1G_PAPHA1.442e-5453.27Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH6_PONAB2.460e-5451.76Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH1A_PONAB2.460e-5453.27Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1S_HORSE3.212e-5453.27Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1_GEOAT9.347e-5452.79Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionDC900171 VSS Citrus sinensis cDNA clone VS27V94 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900171 ID=DC900171; Name=DC900171; organism=Citrus sinensis; type=EST; length=656bp
CTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAG
GCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAA
AAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATG
TTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTT
GGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGA
TCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGG
AATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGG
ATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTC
GATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTG
AATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCC
CCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGG
GGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTT
TTGGATTGGGTGCAGNTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCA
GGGGCT
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