CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBCM (30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 ++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V + RPLSK K W + +I++KA++ Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRECRPLSKTKSWTLVKIVEKAKM 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBCH (30S ribosomal protein S17 OS=Vibrio cholerae GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 ++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V + RPLSK K W + +I++KA++ Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRECRPLSKTKSWTLVKIVEKAKM 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBC3 (30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 ++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V + RPLSK K W + +I++KA++ Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRECRPLSKTKSWTLVKIVEKAKM 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THEMA (30S ribosomal protein S17 OS=Thermotoga maritima GN=rpsQ PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +RPLSK K W V I+++ Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDERNECKIGDVVEIEETRPLSKTKRWRVVRIIQR 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SYNS9 (30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9902) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = -1 Query: 345 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 569 +K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +RP+S+ K WA+AE+L Sbjct: 3 VKERVGTVVSDKMEKTVVVAVETRFPHPIYQKTVSRTTRYKAHDEDNSCRVGDRVRITETRPMSRQKRWAIAEVL 77
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBHB (30S ribosomal protein S17 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rpsQ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = -1 Query: 330 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 554 G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C +GD V + RPLSK K W + ++L+KA+I Sbjct: 10 GRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGLGDTVEIAECRPLSKTKSWTLVKVLEKAKI 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBF1 (30S ribosomal protein S17 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rpsQ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 38/80 (47.50%), Postives = 60/80 (75.00%), Query Frame = -1 Query: 333 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 572 +++++ G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENN+C +GD V + RPLSK K W + I++KA+ Sbjct: 4 KIRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLHAHDENNECGLGDTVEIRECRPLSKTKSWTLVNIVEKAK 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THEPX (30S ribosomal protein S17 OS=Thermoanaerobacter sp. (strain X514) GN=rpsQ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = -1 Query: 336 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 557 +G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLSK K W + EI+K+A Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLSKEKRWRLVEIVKRA 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THEP3 (30S ribosomal protein S17 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rpsQ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = -1 Query: 336 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 557 +G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLSK K W + EI+K+A Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLSKEKRWRLVEIVKRA 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SYNR3 (30S ribosomal protein S17 OS=Synechococcus sp. (strain RCC307) GN=rpsQ PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 41/75 (54.67%), Postives = 58/75 (77.33%), Query Frame = -1 Query: 345 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 569 +K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ HDE+N+C +GDRVR+ +RPLS+ K WAVAEI+ Sbjct: 3 VKERVGTVVSDKMEKTVVVAVENRFPHPIYKKTVSRTTRYKVHDEDNRCQVGDRVRITETRPLSRSKRWAVAEIM 77 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |