CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_MARAV (30S ribosomal protein S17 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = -1 Query: 336 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 566 +++ G VVSNKM KS+VV V+R H +Y +Y+KR++K AHDE+NQCNIGD V + +RP+SK K WA+ E+ ++A Sbjct: 9 RTLSGKVVSNKMDKSIVVLVERQVKHPLYGKYMKRSTKIHAHDESNQCNIGDTVTIQETRPVSKTKSWALVEVTERA 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_GEOLS (30S ribosomal protein S17 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = -1 Query: 336 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 566 ++ G+VVS+KM+K+VVV VDRL H +YN+Y+KR+ K+ HDE N C GD+V++ RPLSK K WA+ +IL+ A Sbjct: 8 RTQTGVVVSDKMEKTVVVRVDRLVKHPLYNKYIKRSVKYKVHDEKNSCKAGDKVQIVECRPLSKDKRWALRQILESA 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ROSCS (30S ribosomal protein S17 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17 Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = -1 Query: 339 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 557 VG VVSNKMQK+VVVAVD L H +Y + V+RTSKF AHDE QC IGD VR+ +RPLSK K W V EI+K+ Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIVRRTSKFHAHDE-QQCQIGDVVRIGETRPLSKTKRWEVVEIIKR 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_MOOTA (30S ribosomal protein S17 OS=Moorella thermoacetica (strain ATCC 39073) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K+ VG VVS+KM K+VVVAV+ H + N+ ++ T KF AHDE N+C IGD+VR+ +RPLSK K W V EI+++AR Sbjct: 7 KTRVGSVVSDKMDKTVVVAVEDRVRHPLLNKIIRHTRKFKAHDEKNECRIGDKVRIMETRPLSKEKRWRVVEIMERAR 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEDO (30S ribosomal protein S17 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K WA+ E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPLYGKYIKRTTKIHAHDETNQCNEGDVVTISQCRPLSKTKSWALVEVVTKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ROSS1 (30S ribosomal protein S17 OS=Roseiflexus sp. (strain RS-1) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = -1 Query: 339 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 557 VG VVSNKMQK+VVVAVD L H +Y + ++RTSKF AHDE QC IGD VR+ +RPLSK K W V EI+K+ Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIIRRTSKFHAHDE-QQCRIGDIVRIGETRPLSKTKRWEVVEIIKR 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_PROMH (30S ribosomal protein S17 OS=Proteus mirabilis (strain HI4320) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 37/79 (46.84%), Postives = 61/79 (77.22%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G VVS+KM+KSVVVA+DR+ H +Y ++++RT+K HDENN+C +GD V + +RP+SK K WA+ +++KA Sbjct: 4 KIRTLQGRVVSDKMEKSVVVAIDRMVKHPLYGKFIRRTTKLHVHDENNECGMGDVVEIRQTRPISKTKSWALVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_GEOMG (30S ribosomal protein S17 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K+ VG+VVS+KM K+VVV V L H VYN+Y+KR+ K+ AHDE N C GDRV++ +RPLSK K W V +I+ + Sbjct: 8 KTQVGIVVSDKMDKTVVVQVSHLVKHPVYNKYIKRSVKYKAHDEENSCKSGDRVQIVETRPLSKDKRWRVRQIIDR 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ENT38 (30S ribosomal protein S17 OS=Enterobacter sp. (strain 638) GN=rpsQ PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G VVS+KM+KS+VVA++R+ H +Y +++KRT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERIVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIHECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_HAHCH (30S ribosomal protein S17 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = -1 Query: 336 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 569 +++ G VVS+KM KS+VV V+R H +Y +YVKR+SK AHDENN+C IGD V++ SRPLSK K W + I+++A Sbjct: 8 VRTETGKVVSDKMDKSIVVLVERRVKHPLYGKYVKRSSKLHAHDENNECRIGDTVQVQESRPLSKTKSWKLVNIVERA 85 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |