CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_HELMI (30S ribosomal protein S17 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 ++ K+ +G V SNKM+K+VVVAV+ H +Y R VK+T KF AHDE N C IGD V + +RPLSK K W V I++KA I Sbjct: 5 AERKTRIGKVTSNKMEKTVVVAVESRIQHPLYGRTVKKTKKFKAHDEENACQIGDVVEIMETRPLSKEKRWRVVRIVEKAVI 86
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CYTH3 (30S ribosomal protein S17 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K G VVSNKM KS+ VAV+R H Y +++ +T+K MAHDEN +C IGD VR+ +RPLSK K W + E+++KA+ Sbjct: 10 KERTGKVVSNKMNKSITVAVERKVKHAKYGKFIHKTTKLMAHDENQECGIGDTVRVMETRPLSKLKRWRLVEVIEKAK 87
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CLOD6 (30S ribosomal protein S17 OS=Clostridium difficile (strain 630) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = -1 Query: 333 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 557 +G VVS+KM K++VVAV+ H +YN+ VKRT KF AHDE N CNIGDRV++ +RPLSK K + + E+++K + Sbjct: 10 IGRVVSDKMDKTIVVAVEEFVRHPLYNKRVKRTKKFKAHDEKNICNIGDRVKIMETRPLSKDKRFRLVEVVEKVK 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ALISL (30S ribosomal protein S17 OS=Aliivibrio salmonicida (strain LFI1238) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 38/80 (47.50%), Postives = 59/80 (73.75%), Query Frame = -1 Query: 333 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 572 +++++ G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENN+C GD V + RPLSK K W + I++KA+ Sbjct: 4 KIRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLHAHDENNECGQGDLVVIRECRPLSKTKSWTLVNIVEKAK 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPY (30S ribosomal protein S17 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPS (30S ribosomal protein S17 OS=Yersinia pseudotuberculosis GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPP (30S ribosomal protein S17 OS=Yersinia pestis (strain Pestoides F) GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPN (30S ribosomal protein S17 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPE (30S ribosomal protein S17 OS=Yersinia pestis GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_YERPB (30S ribosomal protein S17 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rpsQ PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17 Identity = 37/79 (46.84%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENN+C IGD V + RPLSK K W + +++KA Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKA 82 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |