DC900167
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900167 vs. ExPASy Swiss-Prot
Match: RL6_THEAC (50S ribosomal protein L6P OS=Thermoplasma acidophilum GN=rpl6p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14 Identity = 54/182 (29.67%), Postives = 92/182 (50.55%), Query Frame = 1 Query: 85 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTV-IRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 627 + ++ IPDG KV I+ + + +S++F N L+ D T +KI+A + + T S + N+I G+ G++Y+M+ Y+HFP+ S+ K + I NF GE+ R +++ TV ++ D+V + G + V +AA I + +K D R F DGIY+ K Sbjct: 7 ARSIKIPDGFKVSISGTTVTISYGGKTISKNFA--NNYVKLVEDGST----IKINASKNNSMVRGIVGTWASEINNMIKGLKDGFQYEMKIDYSHFPMRVSV--KGKTVVIENFFGERSPRTAEIVGDTTVTVKGDRV----YIAGISKKDVGETAANIERSTIIKGFDPRVFQDGIYLISK 176
BLAST of DC900167 vs. ExPASy Swiss-Prot
Match: RL6_PICTO (50S ribosomal protein L6P OS=Picrophilus torridus GN=rpl6p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.732e-14 Identity = 51/174 (29.31%), Postives = 88/174 (50.57%), Query Frame = 1 Query: 100 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 618 +PD V+ + ++++G G+ SR F+ + ++ +KI ++ T + T S LI GVTKG+ Y M+ + HFP+ S+ + +E NFLGEK R ++DG V VK D + ++G D + +AA I + ++++ D R F DGI++ Sbjct: 12 LPDDVQATMENNELKIKGKLGEASRIFRDNYVKAYIEGSS------VKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVSVRGDKLIVE--NFLGEKSPRSAKIVDGCKV----SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
BLAST of DC900167 vs. ExPASy Swiss-Prot
Match: RL6_THEVO (50S ribosomal protein L6P OS=Thermoplasma volcanium GN=rpl6p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 51/182 (28.02%), Postives = 91/182 (50.00%), Query Frame = 1 Query: 85 SETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 627 + ++IP VKV ++ ++ + KL + F + L+ ++ K+KI + + + T S + N++ G+ +G++Y+M+ Y+HFP+ S+ K + I NF GE+ R +++ V VK D L L+G + V +AA I + +K D R F DGIY+ K Sbjct: 7 ASVIEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYV--RLLVEDN----KIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMRVSV--KGKTVVIENFFGERSPRTAEIVGETQV----SVKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176 The following BLAST results are available for this feature:
BLAST of DC900167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900167 ID=DC900167; Name=DC900167; organism=Citrus sinensis; type=EST; length=830bpback to top |