CN186094

Overview
NameCN186094
Unique NameCN186094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:5..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  227 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 538
            S +F RA  AEF+AT +F++  + + +     N + S   +  IA AFG  I  LV     ISG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 53/176 (30.11%), Postives = 83/176 (47.16%), Query Frame = 2
Query:  236 FYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTK--CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 748
            F R  +AEF  T   +YI   S L     V       C    +QG A+A       +++  +GISG  +NPAVT+G     ++ +   + +++ QC+GA+ GAG++K  +       L+  A  +A G     G   E++ T  LV+ V     A  +  D  +  +APL IG AV
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRVCLICLVQGFAFA------AIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYERDLS--ATTLATGVNVARGFFLEMVTTSFLVFVVLGV--AVYNEWDPKISRVAPLAIGCAV 195          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 55/198 (27.78%), Postives = 94/198 (47.47%), Query Frame = 2
Query:  176 DYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYI---SVLTVMGVVKSNTKCSTVG--IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            D ++ P   ++     K    ++   +EF+ T   +Y    SV     V   +   + +G  IQG+A A       L++  +G+SG ++NPAVTL   L+ ++ L  +L+Y+  Q LG I GAG++ G +    Y R+  G   +A G   G     E++ T +L   V     +  +  D  +  +AP  IG A+F+
Sbjct:   13 DPLKDPSKMIYRRPISKPVKAFKGFFSEFLGTLYLVYFCGGSVCAAFAVAGDSAARALLGGLIQGMALA------ALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCL-PNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGT--SVFNVWDRRLNRIAPFAIGLALFI 200          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP9_HUMAN (Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 51/192 (26.56%), Postives = 86/192 (44.79%), Query Frame = 2
Query:  221 LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG-----GANVVAHGY--------TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            LKS S  +  ++EF+ TF+ + +    V   + S  +    G+  I   F   + + +Y   G+SGGHINPAV+L + L  ++   +  FY+  Q LGA  GA  V G    G      G     G N  AH +        +  +    +++ T +L+  VF+  D++          L P+ IG  + ++
Sbjct:   18 LKS-SLAKETLSEFLGTFILIVLGCGCVAQAILSRGRFG--GVITINVGFSMAVAMAIYVAGGVSGGHINPAVSLAMCLFGRMKWFKLPFYVGAQFLGAFVGAATVFGIYYDGLMSFAGGKLLIVGENATAHIFATYPAPYLSLANAFADQVVATMILLIIVFAIFDSRNLGAPRG---LEPIAIGLLIIVI 203          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 2
Query:  227 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 538
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQAMPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 51/164 (31.10%), Postives = 71/164 (43.29%), Query Frame = 2
Query:  236 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKG--------FMGAGQYGRLAGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKRS 694
            F+R G AEF+ T + +   V + +    +N    +      AW FG M+ V  Y   GISGGH+NPAVT+ L + RK    +   Y+  Q  GA  G  +  G        F G       A G  +  +     T  +    E IGT VLV  +F+  D   S
Sbjct:  309 FFREGFAEFLGTLVLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTPATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNS 470          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 58/183 (31.69%), Postives = 82/183 (44.81%), Query Frame = 2
Query:  254 AEFIATFLFLYISVLTVMG--VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAIC-----------GAG--VVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            AEF+ TF      VL   G  V+ +      +G  G+A AFG  +  + Y    ISG H+NPAV++GL+   +    +   Y+V Q LGAI            GAG  V KGF   G      GG +++A        L  E++ T   +  +  ATD +  A        APL IG A+ L+
Sbjct:    6 AEFLGTFWL----VLGGCGSAVLAAGFPNLGIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLA-------ALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLI 171          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  227 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 538
            S +F RA  +EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAIL 99          
The following BLAST results are available for this feature:
BLAST of CN186094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
AQP2_TALEU4.342e-1139.42Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQPB_DICDI5.671e-1130.11Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQPA_DICDI7.406e-1127.78Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
AQP9_HUMAN7.406e-1126.56Aquaporin-9 OS=Homo sapiens GN=AQP9 PE=1 SV=1[more]
AQP2_HORSE7.406e-1138.46Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
YI7H_SCHPO9.673e-1131.10Uncharacterized membrane protein C977.17 OS=Schizo... [more]
AQPZ_CHRVO9.673e-1131.69Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQP2_DUGDU9.673e-1138.46Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186094 ID=CN186094; Name=CN186094; organism=Citrus sinensis; type=EST; length=758bp
GGGCTGCGGCCCCACATAACGGCCACAACAAAAAAGCAGTGCTTCTTATT
GACTGTTTTGTGCTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAG
GATGCCTTACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGAC
GGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGC
CGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGT
ATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGAC
AGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTC
AAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGC
ACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCT
GTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGA
TGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATG
GGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCA
TGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTG
TTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGG
GACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
TTTGGTTC
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