CN186094

Overview
NameCN186094
Unique NameCN186094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:5..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 2
Query:  215 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 748
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   LFY + Q LGA     ++K F+  G+     G A     G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V
Sbjct:   10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 180          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 59/182 (32.42%), Postives = 93/182 (51.10%), Query Frame = 2
Query:  212 PGELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 748
            PGE       RA  AEF +  +F++    + M  G +  +   +  G+   + +    +FV V   A +SGGH+NPAVT G F+   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I+APL IG  V
Sbjct:   11 PGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIV 183          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 60/179 (33.52%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  218 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YM  Q LGA+ GA V+     A   G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLA--LNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTL 170          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.541e-16
Identity = 65/181 (35.91%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  215 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 748
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A  SGGH+NPAVT GL +   +++   LFY V Q LGA     +++ F+  G+    A   + V+ G T+ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V
Sbjct:   10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLR-FVTHGK----AIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIV 181          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 58/168 (34.52%), Postives = 83/168 (49.40%), Query Frame = 2
Query:  233 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPI 736
            + +R   AE I T L + I   +  GV  S        +  IA  FG +I  +V C   +SG HINPAVT GL +   +S+ +A+FY+++QC+GAI G+ ++K    A   G L      +A G T   G   E   TFVL+  V S  D +R    +  P+   L I
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTLC--MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLAI 185          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.483e-16
Identity = 61/179 (34.08%), Postives = 86/179 (48.04%), Query Frame = 2
Query:  218 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            EL+S SF+RA  AEF AT  +++      +G     T    + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  YM  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTL 170          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.855e-16
Identity = 59/179 (32.96%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  218 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ Y+V Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTL 170          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 62/181 (34.25%), Postives = 97/181 (53.59%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAV 748
            RA +AEF++TF+F++    +++ + K      ++T  +T G +  +A A    +F  V     +SGGH+NPAVT    +  ++S+ RA++Y V Q +GAI    +++    G    G +         VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIV 191          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 748
            +AG+AEFI+TF+F++    + +   K  ++   +  G+   + A    +FV V   A ISGGH+NPAV  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIV 181          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 59/179 (32.96%), Postives = 87/179 (48.60%), Query Frame = 2
Query:  218 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            EL+S SF+RA  AEF A+  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA+ YMV Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTL 170          
The following BLAST results are available for this feature:
BLAST of CN186094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
TIP21_ORYSJ9.032e-1735.91Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH9.032e-1732.42Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
MIP_RABIT9.032e-1733.52Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP22_MAIZE1.541e-1635.91Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
AQP_CICVR3.432e-1634.52Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
MIP_CANFA4.483e-1634.08Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP5.855e-1632.96Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP32_ARATH7.646e-1634.25Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP1_MEDSA7.646e-1635.03Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
MIP_BOVIN7.646e-1632.96Lens fiber major intrinsic protein OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186094 ID=CN186094; Name=CN186094; organism=Citrus sinensis; type=EST; length=758bp
GGGCTGCGGCCCCACATAACGGCCACAACAAAAAAGCAGTGCTTCTTATT
GACTGTTTTGTGCTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAG
GATGCCTTACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGAC
GGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGC
CGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGT
ATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGAC
AGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTC
AAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGC
ACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCT
GTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGA
TGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATG
GGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCA
TGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTG
TTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGG
GACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
TTTGGTTC
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