CN186084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 424 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LGI PKGVLLYGPPGTGKTL+ARA A T Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 187 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L ++R + R + + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LG+ PKGVLLYGPPGTGKTL+ARA A T Sbjct: 32 LDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 63/198 (31.82%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 187 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L ++R L R + + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T Sbjct: 31 LDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 63/198 (31.82%), Postives = 97/198 (48.99%), Query Frame = 1 Query: 187 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L + R L R + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H + F+ LGI PKGVLLYGPPGTGKTL+ARA A T Sbjct: 37 LDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 234
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 499 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 V+ +K KVPD TY+ IGGL +++K+++E+IELP++HPELFE LGI PKGVLL GPPGTGKTLLA+AVA+ Sbjct: 165 VSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235 HSP 2 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 37/77 (48.05%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 487 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 V+P + +VP+ ++ IGGL++ +E++E +E P+K E+FE +G+ PKGVLL+GPPGTGKTLLA+AVA+ + Sbjct: 434 VEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANES 510
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 43/63 (68.25%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 523 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 VPD TY+ IGGL ++++ ++E+IELP+KHPELF+ LGI PKGVLLYGPPGTGKTL+A+AVA+ Sbjct: 176 VPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238 HSP 2 Score: 77.411 bits (189), Expect = 8.467e-14 Identity = 34/77 (44.16%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 487 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 ++P + +VP+ ++ IGGL+ +E+ E +E P+K+PE+F + I P+G+LL+GPPGTGKTLLA+AVA+ + Sbjct: 437 IEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANES 513
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 44/68 (64.71%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 514 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 +E+V +Y+ IGGL +Q+ +I+E+IELP+KHPELFE LGI PKGV+LYGPPGTGKTL+ARAVA+ + Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANES 248 HSP 2 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 +VP+ +D IGGL+ +EIKE +ELP+ P++F+ LGI KG LLYGPPG GKTLLA+AVA Sbjct: 460 EVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVA 522
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: SPAT5_MOUSE (Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 499 VNLMKV---EKVPDS----TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 +NL K+ K DS TYDMIGGL+ Q+K I+E+IELP+K PELF+S GI P+G+LLYGPPGTGKT++ARAVA+ Sbjct: 332 INLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409 HSP 2 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 523 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 VP+ ++ IGGL+ ++K+ +E P+KHP+ F +GI PKGVLLYGPPG KT++A+A+A+ + Sbjct: 621 VPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 1 Query: 535 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 TYDMIGGL Q+K I+E+IELP+K PELF+S GI P+GVLLYGPPGTGKT++ARAVA+ Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409 HSP 2 Score: 72.7886 bits (177), Expect = 2.085e-12 Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 1 Query: 184 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGS---YVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 E+++ V L+ L+ +L RV L E +LLQ S YVG +KV+ L + + ++ ++ L++ ++ I PS + + VP+ ++ IGGL+ ++++ +E P+KHPE F +GI PKGVLLYGPPG KT++A+A+A+ + Sbjct: 518 EIEIGVPNAQDRLDILQ----KLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL----RRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAI-----DVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANES 685
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 40/76 (52.63%), Postives = 61/76 (80.26%), Query Frame = 1 Query: 490 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 DP+ + E + D YD +GG+ +Q+ +IKE++ELP++HP+LF+++GI P+G+LL+GPPGTGKTL+ARAVA+ T Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268 HSP 2 Score: 71.633 bits (174), Expect = 4.646e-12 Identity = 30/66 (45.45%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 514 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 V + P++T+ IGGL +E++E+++ P++HPE + G+ +GVL YGPPG GKTLLA+A+A+ Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539 The following BLAST results are available for this feature:
BLAST of CN186084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186084 ID=CN186084; Name=CN186084; organism=Citrus sinensis; type=EST; length=718bpback to top |