CN186084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 K+P+ T+D +GGL+ + E I+LP++ PELF G+ + G+L YGPPGTGKTLLA+A+A Sbjct: 987 KIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIA 1048
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 508 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 + + K D +D IGGL + + + + I+LP K+PELF +L I Q G+LLYGPPGTGKTLLA +A + Sbjct: 829 VNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX6_RAT (Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 K+P ++ +GGL KEI E I+LP++HPEL SLG+ + G+LL+GPPGTGKTLLA+AVA Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAKAVA 756
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 K+P+ T+D +GGL I E I+LP++ PELF G+ + G+L YGPPGTGKTLLA+A+A Sbjct: 984 KIPNVTWDDVGGLGNVKDAITETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIA 1045
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 K+P+ ++ IGGL+ EI + I++P+K PELF S G+ + G+L YGPPGTGKTLLA+AVA Sbjct: 716 KIPNVFWEDIGGLEMVKGEILDTIDMPLKFPELFAS-GMKKRSGILFYGPPGTGKTLLAKAVA 777
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: CD48B_ARATH (Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 472 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 I S V P +N ++P T+D +GGL K++++ +E PIKH F +GI+ +G+LL+GPPG KT LA+A A+ Sbjct: 263 IAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 33/82 (40.24%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 469 LILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLG--IAQPKGVLLYGPPGTGKTLLARAVA 708 L+LPS++D ++D IGG+D+ + ++ + + P+K+PE+F++ G ++ PKG+LLYGPPG GKT+LA+A+A Sbjct: 78 LVLPSEIDV-------------SFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALA 146
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 490 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 DP N ++ ++ IGGL+ I ++KE++ LP+ +PE+F L I P+GVL +GPPGTGKTL+AR +A Sbjct: 361 DPFANRENLD------FNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLA 427
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 472 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 I PS ++ LM ++ V ++ IGGL+ ++K+ IE P+K P F +G+ QPKGVLLYGPPG KT L RA+A Sbjct: 444 IQPSSFRSVIGLMDIKPVD---WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALA 519
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PEX6_MOUSE (Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 520 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 ++P ++ +GGL KEI E I+LP++HPEL SLG+ + G+LL+GPPGTGKTLLA+AVA Sbjct: 699 RIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAKAVA 759 The following BLAST results are available for this feature:
BLAST of CN186084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186084 ID=CN186084; Name=CN186084; organism=Citrus sinensis; type=EST; length=718bpback to top |