CN186084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33 Identity = 73/183 (39.89%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 166 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 714 Y ++ L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ + +V+ + ++VV P RVAL + + +LPS+ DP V +V + P TY+ IGGL++Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AVA+H Sbjct: 13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANH 195
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33 Identity = 75/183 (40.98%), Postives = 113/183 (61.75%), Query Frame = 1 Query: 163 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P RVAL + + +LPS DP V +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+AH Sbjct: 21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 72/183 (39.34%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 166 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 714 Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P +RVAL + + +LP++ DP V +V + P TY IGGL++Q+ E++E +ELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AVA+H Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANH 195
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 77/200 (38.50%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 139 KQGEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 ++GE L +Y L+ + EL+ Q+RQ + LE Q+ VR K E++ ++ P +G V ++ +N+V+V+ +++V P R L S + ILP+ D + M+V + P Y+ IGGL++QI EI+E +ELP+K PE+F +GI PKGVLL+GPPGTGKTLLARAVAH T Sbjct: 12 QKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQT 211
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33 Identity = 74/192 (38.54%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 136 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 711 S++ + Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G +++++ +++ +V+ + ++VV P RVAL + + +LPS+ DP V +V + P +Y+ IGGLD+Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+AH Sbjct: 11 SEEYDDYIMYLKKRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAH 195
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 75/178 (42.13%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 184 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 EL+ Q+RQ + +E Q+ VR LK E + L+ P +G VV V+ N+V+V+ +++V P R L S + +LPS D V M++ P Y IGGL +QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHET 236
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 157 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 157 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 157 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 80/184 (43.48%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 157 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188 The following BLAST results are available for this feature:
BLAST of CN186084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186084 ID=CN186084; Name=CN186084; organism=Citrus sinensis; type=EST; length=718bpback to top |