CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   10 LLVDPLT--HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            +LVDP+   ++V + DFGSA  +     + +Y+ SR+YRAPE+I G   +  +ID+WS GCV+AEL LG PL+PG +  DQ+  I +  G P
Sbjct:  322 MLVDPVRQPYRVKVIDFGSASHVSKAVCS-TYLQSRYYRAPEIILGLP-FCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 411          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 1
Query:   10 LLVDPLT--HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            +LVDP+   ++V + DFGSA  +     + +Y+ SR+YRAPE+I G   +  +ID+WS GCV+AEL LG PL+PG +  DQ+  I +  G P
Sbjct:  322 MLVDPVRQPYRVKVIDFGSASHVSKAVCS-TYLQSRYYRAPEIILGLP-FCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 411          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 61/185 (32.97%), Postives = 80/185 (43.24%), Query Frame = 1
Query:    7 NLLVDPLTHQVN----ICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF-------RFPQIKA--------------HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 486
            N  VD   H V+    + DFG A        + + +CSR YR PE+I G   ++   DIW  GC+L EL LG  LF   N V  L  + KV+G             + D+          +IK+              HP H  F         DLASRLL+Y PS R +A +A +HPF  E  E
Sbjct:  752 NNSVDHYCHLVDTDIVVIDFGGAT--FENTHHTAIVCSRPYRPPEIILGMG-WSYPCDIWGVGCILVELYLGYTLFDTHNNVQHLAMMEKVMGPFPNSMSNVSKKYFNDYGTLNRPQNSDEIKSMERVEGLKQLKEYFHPCHDSF--------FDLASRLLEYQPSKRISASDALSHPFLFETIE 925          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDK8_AEDAE (Cell division protein kinase 8 OS=Aedes aegypti GN=Cdk8 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 61/188 (32.45%), Postives = 90/188 (47.87%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANIS----YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF---------PGENAVDQLVEIIKVLGTPTR---EEIRCMNPNYT---DFRFPQ------IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLP 522
            +V I D G A+   A    ++     + + +YRAPEL+ GA  YT +IDIW+ GC+ AELL  +P+F               DQL  I  V+G P     E+IR M  ++T   DF+         +K    HK+   +   +A  L  +LL   P+ R T+ +A   P+F E   P A +  G P+P
Sbjct:  168 RVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIRKMPEHHTLTKDFKRSNYANCSLVKYMERHKI---KPDSKAFHLLQKLLLMDPNKRITSEQAMQDPYFSEDPMPTADVFAGCPIP 352          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CSK2A_ENCCU (Probable casein kinase II subunit alpha homolog OS=Encephalitozoon cuniculi GN=CKA1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG-TPTREEIR-----CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 474
            N++++    ++ I D+G A+     +     + SR+Y+ PEL+     Y  S+DIWS GCVLAEL+   +P F GE+  DQLV+I ++LG T  ++ +R      +NP Y      ++    +       +   AIDL  ++L Y    R TA E   HP F+
Sbjct:  156 NMVINQARRELKIIDWGLAEFYHPKKEYSVRVASRYYKGPELLVDYPYYDYSLDIWSFGCVLAELVFKKRPFFHGESNSDQLVKIARILGYTHLKKYVRKYKMAPLNPKYEGVG-ERVLLSSFTPPGKTGLYTNAIDLLEKILIYDHQDRPTADECLRHPLFE 317          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HIPK2_MOUSE (Homeodomain-interacting protein kinase 2 OS=Mus musculus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1
Query:   10 LLVDPLT--HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            +LVDP    ++V + DFGSA  +     + +Y+ SR+YRAPE+I G   +  +ID+WS GCV+AEL LG PL+PG +  DQ+  I +  G P
Sbjct:  331 MLVDPSRQPYRVKVIDFGSASHVSKAVCS-TYLQSRYYRAPEIILGLP-FCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 420          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1
Query:   10 LLVDPLT--HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            +LVDP    ++V + DFGSA  +     + +Y+ SR+YRAPE+I G   +  +ID+WS GCV+AEL LG PL+PG +  DQ+  I +  G P
Sbjct:  331 MLVDPSRQPYRVKVIDFGSASHVSKAVCS-TYLQSRYYRAPEIILGLP-FCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 420          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 1
Query:   10 LLVDPLT--HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            +LVDP    ++V + DFGSA  +     + +Y+ SR+YRAPE+I G   +  +ID+WS GCV+AEL LG PL+PG +  DQ+  I +  G P
Sbjct:  331 MLVDPSRQPYRVKVIDFGSASHVSKAVCS-TYLQSRYYRAPEIILGLP-FCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 420          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDK9_SCHPO (Serine/threonine-protein kinase cdk9 OS=Schizosaccharomyces pombe GN=cdk9 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 1
Query:    1 SVNLLVDPLTHQV-NICDFGSAKQLIAGE-AN-------------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ-IKAHPWH----KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            + NLL+D   H +  I DFG A+ +     AN                + +R+YR+PEL+ G   YTT+ID+WS GC++AE+  G+P+  G + +DQL +I ++ G+PT+  +    PN+      + +++ P H    +        E   L   +L  +P  R +A  A  H +F
Sbjct:  169 AANLLID--NHGILKIADFGLARVITEESYANKNPGLPPPNRREYTGCVVTRWYRSPELLLGERRYTTAIDMWSVGCIMAEMYKGRPILQGSSDLDQLDKIFRLCGSPTQATM----PNWEKLPGCEGVRSFPSHPRTLETAFFTFGKEMTSLCGAILTLNPDERLSASMALEHEYF 339          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: BUR1_EMENI (Serine/threonine-protein kinase bur1 OS=Emericella nidulans GN=ptkA PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 1
Query:   37 VNICDFGSAKQLI---------AGEANISY---ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            + I DFG A+            AGEA   Y   + +R+YR PEL+     YT++ID+W  GCV  E+  G+P+  G + ++Q   I  ++GTPT E +   +  P     +    +     +VF K   P AI L + LL+     R  A++A  HP+F
Sbjct:  169 LQIADFGLARPFDEAPPQPGKGAGEAKRDYTTLVVTRWYRPPELLLQLRRYTSAIDMWGVGCVFGEMFKGKPILAGNSDLNQAQLIFSLVGTPTEENMPGWSSLPGCEGVKHFGNRPGNLAEVF-KDQGPMAISLLTELLKLDWRKRVNAIDALKHPYF 326          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIPK1_MOUSE6.742e-1444.57Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN6.742e-1444.57Homeodomain-interacting protein kinase 1 OS=Homo s... [more]
CLKA_DICDI6.742e-1432.97Probable serine/threonine-protein kinase clkA OS=D... [more]
CDK8_AEDAE6.742e-1432.45Cell division protein kinase 8 OS=Aedes aegypti GN... [more]
CSK2A_ENCCU8.805e-1432.52Probable casein kinase II subunit alpha homolog OS... [more]
HIPK2_MOUSE1.502e-1344.57Homeodomain-interacting protein kinase 2 OS=Mus mu... [more]
HIPK2_MESAU1.502e-1344.57Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN1.502e-1344.57Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
CDK9_SCHPO1.502e-1329.94Serine/threonine-protein kinase cdk9 OS=Schizosacc... [more]
BUR1_EMENI1.502e-1332.08Serine/threonine-protein kinase bur1 OS=Emericella... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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