CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK15_RAT (Mitogen-activated protein kinase 15 OS=Rattus norvegicus GN=Mapk15 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 67/201 (33.33%), Postives = 108/201 (53.73%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLI------AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHP---WHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKL 582
            N+L+D    +V +CDFG A+ L        G+A   Y+ +R+YRAPE++  +  YT  +D+WS GC+L E+L GQPLFPG +   QL  I++ +  P+ EE++ +  +Y+      + + P      +     PPEA+DL  RLL ++P  R +A +A  HP+      P+     G  +    +   +LS  +PE  N+L
Sbjct:  143 NVLLDAAC-RVKLCDFGLARSLSDFPEGPGGQALTEYVATRWYRAPEVLLSSRWYTPGVDMWSLGCILGEMLRGQPLFPGTSTFHQLELILETIPLPSMEELQGLGSDYSALILQNLGSRPRQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHPYVQRFHCPDREWTRGSDVRLPVHEGDQLS--APEYRNRL 340          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25
Identity = 61/155 (39.35%), Postives = 93/155 (60.00%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE---EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            ++ I DFG A+Q         Y+ +R+YRAPE+I     YT ++DIWS GC++AE+LLG+PLF G + +DQL+EI+KV GTP++E   +++  +      + P+ +     ++    + P+AI +   +L   P  R TA EA A PFF E REP
Sbjct:  164 ELKILDFGLARQ--TDSEMTGYVVTRWYRAPEVILSWMHYTQTVDIWSVGCIMAEMLLGKPLFKGHDHLDQLMEIMKVTGTPSKEFTAKLQSEDARNYVTKLPRFRKKDL-RILLPNVNPQAIKVLDGMLLLDPESRITAAEALAFPFFSEFREP 315          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: ERKA_DROME (Mitogen-activated protein kinase ERK-A OS=Drosophila melanogaster GN=rl PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25
Identity = 66/171 (38.60%), Postives = 102/171 (59.65%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            NLL++  T  + ICDFG A+  IA   +        Y+ +R+YRAPE++  +  YT SIDIWS GC+LAE+L  +P+FPG++ +DQL  I+ VLG+P+R+++ C+      NY +   P     PW K+F       A+DL  ++L ++P  R    EA AHP+ ++  +P
Sbjct:  217 NLLLNK-TCDLKICDFGLAR--IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLECIINEKARNYLE-SLPFKPNVPWAKLF-PNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDP 382          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.811e-25
Identity = 69/212 (32.55%), Postives = 111/212 (52.36%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANIS----YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFRFPQIKAHPWHKVF--------------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 609
            + ICDFG A+ + + E N      Y+ +R+YRAPE++    EYTT+ID+WS GC+LAE+L G+PLFPG +  +QL  I++VLGTP  E+   I+           P  K  P+ ++F                 + P A+DL  +LL ++P+ R T  +A  HP+     +PN    + +     F+F +     + E + KL+ + + + L
Sbjct:  206 LKICDFGLARSIASQEDNYGFMTEYVATRWYRAPEIMLTFQEYTTAIDVWSVGCILAEMLSGRPLFPGRDYHNQLWLIMEVLGTPNMEDYYNIKSKRAREYIRSLPFCKKIPFSELFANTNNNTSTSNTGGRTNINPLALDLLEKLLIFNPAKRITVEDALKHPYLQLYHDPNDEPISDKIPEDFFDFDKMKDQLTIEDLKKLLYEEIMKPL 417          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25
Identity = 59/164 (35.98%), Postives = 100/164 (60.98%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFR--FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 480
            NLL+D  T+ + + DFG A+         ++ + + +YRAPE++ GA +Y+T +D+WS GC+ AE++  +PLFPG++ +D+L +I ++LGTP  +    + C+     DF+  FP+ +A     V    + P  +DL S++L+Y PS R TA +A  H +F +L
Sbjct:  132 NLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCL----PDFKTAFPRWQAQDLATVV-PNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDL 290          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 63/189 (33.33%), Postives = 104/189 (55.03%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR----EPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            + ICDFG A+     +    Y+ +R+YRAPEL+  +++YT +ID+WS GC+  EL+  +PLFPG + V QL  +++++GTP+ +++  +N N   +  + P  +   + + F   + PEAIDL  ++L + P  R T  +A AHP+   L     EP    P        F+F  E    + E + +LI
Sbjct:  195 LKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFLNENAKRYIRQLPPYRRQSFQEKF-PHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTP--------FSFDFEQHALTEEQMKELI 374          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: KSS1_YEAST (Mitogen-activated protein kinase KSS1 OS=Saccharomyces cerevisiae GN=KSS1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 61/164 (37.20%), Postives = 94/164 (57.32%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEAN--------ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE---EIRCMNPNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 492
            + +CDFG A+ L +   +          Y+ +R+YRAPE++    EYTT++DIWS GC+LAE++ G+PLFPG +   QL  I++VLGTP+ E   +I+           P     PW  V+ K  + P+ IDL  ++LQ++P  R +A EA  HP+     +P+
Sbjct:  157 LKVCDFGLARCLASSSDSRETLVGFMTEYVATRWYRAPEIMLTFQEYTTAMDIWSCGCILAEMVSGKPLFPGRDYHHQLWLILEVLGTPSFEDFNQIKSKRAKEYIANLPMRPPLPWETVWSKTDLNPDMIDLLDKMLQFNPDKRISAAEALRHPYLAMYHDPS 320          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_RAT (Cyclin-dependent kinase-like 2 OS=Rattus norvegicus GN=Cdkl2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 62/151 (41.06%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIK---AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++DIW+ GC++ E+L+GQPLFPGE+ +DQL  I+  LG   P  +E+   NP +   R P+IK   A P    + K +P   I LA + L   P  R    +   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDIWAIGCLVIEMLMGQPLFPGESDIDQLHHIMTCLGNLIPRHQELFYKNPVFAGVRLPEIKDIEAEPLESRYPK-LPEVVISLAKKCLHIDPDKRPLCADLLHHDFF 289          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_MOUSE (Cyclin-dependent kinase-like 2 OS=Mus musculus GN=Cdkl2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 61/151 (40.40%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIK---AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++DIW+ GC++ E+L+GQPLFPGE+ +DQL  I+  LG   P  +E+   NP +   R P++K   A P    + K +P   I LA + L   P  R    +   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDIWAIGCLVIEMLMGQPLFPGESDIDQLHHIMTCLGNLIPRHQELFYKNPVFAGVRLPEVKDAEAEPLESRYPK-LPEAVISLAKKCLHIDPDKRPFCADLLRHDFF 289          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_RABIT (Cyclin-dependent kinase-like 2 OS=Oryctolagus cuniculus GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24
Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+L+G+PLFPG++ +DQL  I++ LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R    E   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMLMGEPLFPGDSDIDQLYLIMRCLGNLIPRHQELFYKNPVFAGVRLPEIKESEPLERRYPKLSEVVIDLAKKCLHVDPDKRPFCAELLHHDFF 287          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK15_RAT1.003e-2533.33Mitogen-activated protein kinase 15 OS=Rattus norv... [more]
MK12_DANRE3.811e-2539.35Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
ERKA_DROME3.811e-2538.60Mitogen-activated protein kinase ERK-A OS=Drosophi... [more]
ERK1_CANAL3.811e-2532.55Extracellular signal-regulated kinase 1 OS=Candida... [more]
CDC2_MAIZE4.977e-2535.98Cell division control protein 2 homolog OS=Zea may... [more]
MMK1_MEDSA6.500e-2533.33Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
KSS1_YEAST6.500e-2537.20Mitogen-activated protein kinase KSS1 OS=Saccharom... [more]
CDKL2_RAT6.500e-2541.06Cyclin-dependent kinase-like 2 OS=Rattus norvegicu... [more]
CDKL2_MOUSE6.500e-2540.40Cyclin-dependent kinase-like 2 OS=Mus musculus GN=... [more]
CDKL2_RABIT1.109e-2438.51Cyclin-dependent kinase-like 2 OS=Oryctolagus cuni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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