CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_HUMAN (Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R    E   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 287          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQL-IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            NLL++    ++ I DFG A+   I        + + +YRAP+++ G+ +Y+T IDIWS GC+ AE++ G+PLFPG +  DQL+ I K+LGTP  +    +   P Y D  FP  +  PW + F K +    IDL S++L+  P+ R TA +A  HP+F E
Sbjct:  131 NLLINR-EGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKLPKY-DPNFPVYEPLPW-ETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 287          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 63/160 (39.38%), Postives = 94/160 (58.75%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQL-IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            NLL++    ++ I DFG A+   I        + + +YRAP+++ G+ +Y+T IDIWS GC+ AE++ G+PLFPG +  DQL+ I K+LGTP  +    +   P Y D  FP     PW + F K +    IDL S++L+  P+ R TA +A  HP+F E
Sbjct:  130 NLLINR-EGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGASETDQLMRIFKILGTPNSQNWPDVFKLPKY-DPNFPVYNPLPW-ETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: SUR1_CAEEL (Mitogen-activated protein kinase mpk-1 OS=Caenorhabditis elegans GN=mpk-1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 66/200 (33.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAK----QLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC-MNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            NLL++  T  + ICDFG A+    Q         Y+ +R+YRAPE++  +  YT SID+WS GC+LAE+L  +PLFPG++ +DQL  I+ V+G+P+  +++C +N     +    P     PW +++     P A+DL  ++L ++P  R    +A AHP+ ++  +P        P    F  + E      E + +LI
Sbjct:  225 NLLLNT-TCDLKICDFGLARVTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAEMLSNRPLFPGKHYLDQLNLILAVVGSPSNADLQCIINDKARSYLISLPHKPKQPWARLY-PGADPRALDLLDKMLTFNPHNRIDIEQALAHPYLEQYYDPGDEPVCEEP----FTLEMEFDDLPKEKLKELI 418          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 70/173 (40.46%), Postives = 95/173 (54.91%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH----PFFDELREPNARL 501
            N+LV+     + ICDFG A+  I       Y+ +R+YRAPE++    +Y   +DIWSAGC+ AE+L G+PLFPG++ V+Q   I ++LGTP  + I  +    T  RF    P  +  P    F K   P AIDL  R+L + P  R TA EA AH    P+ D   EP A L
Sbjct:  146 NILVNE-NCDLKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENT-LRFVKSLPMRERQPLKNKF-KNADPTAIDLLERMLVFDPKKRITATEALAHEYLAPYHDPTDEPTAEL 313          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.213e-24
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQL-IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            NLL++    ++ I DFG A+   I        + + +YRAP+++ G+ +Y+T IDIWS GC+ AE++ G+PLFPG +  DQL+ I K+LGTP  +    +   P Y D  FP  +  PW + F K +    IDL S++L+  P+ R TA +A  HP+F E
Sbjct:  130 NLLINR-EGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSDTDQLMRIFKILGTPNSQNWPDVFKLPKY-DPNFPVYEPLPW-ETFIKGLDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANIS-YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPL 519
            NLL++     + ICDFG A+     +  ++ Y+ +R+YRAPEL+     Y TSID+WS GC+ AELL  +P+FPG   ++QL  II +LG+   E+I  + NP    +    P     P+ +++     P AIDL  R+L + PS R + +EA  HP+   L +PN   P   P+
Sbjct:  163 NLLINA-NCDLKICDFGLARTSSGKDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPVFPGTECLNQLKLIINILGSQREEDIEFIDNPKARKYIKSLPYSPGTPFSRLY-PHAHPLAIDLLQRMLVFDPSKRISVIEALQHPYMSPLYDPNTDPPAQVPI 335          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CPK1_CRYNE (Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans GN=CPK1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANIS---------YICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD--FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPP-LFNFKQELSGASPELVNKLIPDHVK 600
            + ICDFG A+         S         Y+ +R+YRAPE++    EYT +ID+WS GC+LAE++ G+PLFPG +   QL  I++VLGTPT ++   +    +    R  +            +  P A+DL  + L +SPS R T  EA  H + +   +P+   PN  PL P  F+F+      S +   ++I D V+
Sbjct:  154 LKICDFGLARSSAKPPPGTSDGGQGFMTEYVATRWYRAPEVMLSFQEYTKAIDLWSVGCILAEMINGKPLFPGRDYHHQLSLILQVLGTPTMDDFNEITSQRSKDYLRALEFTRRQDFSAICPKAKPAAVDLLKQTLTFSPSKRITVEEALMHSYVEAYHDPHDE-PNAEPLKPGFFDFEFHQEKLSRDQWKRMIYDEVQ 352          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24
Identity = 63/167 (37.72%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPP 525
            Q+ + DFG A+   + E N ++ + +R+YRAPEL+FG  +Y +++DIW+AGC+ AELLL +P   G + +DQL +I    GTP   +   M   P+Y +++F  + A P   +F      +A+DL SR+  Y P  R TA +A  H +F  L  P    P+  P PP
Sbjct:  154 QLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVEYQF--VSAPPLRSLF-PMASDDALDLLSRMFTYDPKARITAQQALEHRYF--LSVPAPTKPSQLPRPP 315          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.502e-24
Identity = 63/167 (37.72%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPP 525
            Q+ + DFG A+   + E N ++ + +R+YRAPEL+FG  +Y +++DIW+AGC+ AELLL +P   G + +DQL +I    GTP   +   M   P+Y +++F  + A P   +F      +A+DL SR+  Y P  R TA +A  H +F  L  P    P+  P PP
Sbjct:  154 QLKLADFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVYLPDYVEYQF--VSAPPLRSLF-PMASDDALDLLSRMFTYDPKARITAQQALEHRYF--LSVPAPTKPSQLPRPP 315          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKL2_HUMAN3.226e-2437.84Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=... [more]
CDC2H_PLAYO3.226e-2439.38Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA3.226e-2439.38Cell division control protein 2 homolog OS=Plasmod... [more]
SUR1_CAEEL4.213e-2433.00Mitogen-activated protein kinase mpk-1 OS=Caenorha... [more]
HOG1_CHAGB4.213e-2440.46Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
CDC2H_PLACH4.213e-2439.38Cell division control protein 2 homolog OS=Plasmod... [more]
NTF3_TOBAC5.502e-2437.14Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
CPK1_CRYNE5.502e-2433.50Mitogen-activated protein kinase CPK1 OS=Cryptococ... [more]
CDKD1_ORYSJ5.502e-2437.72Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDKD1_ORYSI5.502e-2437.72Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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