CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURCA (Anthranilate phosphoribosyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=trpD PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  E V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSEQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BORPD (Anthranilate phosphoribosyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 71/151 (47.02%), Postives = 89/151 (58.94%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + SA L+ LR K ET GEI   A+ M ++A  V      D +D+ GTGGDG++T NIST A  +AAA G  +AK             DVLEALG  + L PE V  C+   GIGFM +  +H AMK V PVRK+L V+T+FNILGP
Sbjct:   34 EMSPQIASALLMGLRVKKETVGEITAAAQVMREFATPVVTPNPQDLLDMCGTGGDGSHTFNISTTAMFVAAAAGVPIAKHGGRSASSSSGSADVLEALGANLTLSPEQVAECIQATGIGFMFAPAHHSAMKNVAPVRKELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFT (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 73/166 (43.98%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L +   Q     + +E    +++A L  LR K ET GEI G A  M +++ KV  +     VDIVGTGGDG +T NIST A  +AAA GAKVAK             DVLEALG  I+L P  V   +   G+GFM +  +HP M+ V PVR+++ V+T+FNILGP
Sbjct:   19 LQDEMVQLMRQIMNSEVSGIMVAAILAGLRVKKETVGEIAGAATVMREFSRKVNVQDRTHLVDIVGTGGDGWHTFNISTCAMFVAAAAGAKVAKHGNRSVSSKSGSADVLEALGASIELQPLEVAEAIGCIGVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XYLF2 (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa (strain M23) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 73/166 (43.98%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L +   Q     + +E    +++A L  LR K ET GEI G A  M +++ KV  +     VDIVGTGGDG +T NIST A  +AAA GAKVAK             DVLEALG  I+L P  V   +   G+GFM +  +HP M+ V PVR+++ V+T+FNILGP
Sbjct:   19 LQDEMVQLMRQIMNSEVSGIMVAAILAGLRVKKETVGEIAGAATVMREFSRKVNVQDRTHLVDIVGTGGDGWHTFNISTCAMFVAAAAGAKVAKHGNRSVSSKSGSADVLEALGASIELQPLEVAEAIGCIGVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIY (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  + +    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELIHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIN (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  + +    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELIHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIL (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  + +    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELIHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METMJ (Anthranilate phosphoribosyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 77/178 (43.26%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  + S  DLT AEA   +  +++  A  A I  FL  LR KGET  EI   ARAM   A  V     G  VD  GTGGDGA T NIST A+ +AA  G  V K             DVLEALGV + + P+ V   +  AGI F+ +  YHPAM++ R  R+++ ++TVFN+LGP
Sbjct:    4 EAIARVSSGTDLTPAEAGGVMAEIMHGAATPAQIGGFLTALRMKGETVAEIAAFARAMRAAAVPVALPAPGARVDTCGTGGDGAGTFNISTAAAFVAAGAGVPVVKHGNRGVSSRCGSADVLEALGVSVAIPPDRVGEVLAAAGIAFLFAPAYHPAMQYARIARQEIGIRTVFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEPCP (Anthranilate phosphoribosyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    +I+AF + LR K ET GEI   A+ M ++A  V      + VD+ GTGGDG +T NIST +  +AAA GA+VAK             DVLEALG  I+L PE V   ++  GIGFM +  +H +MK   PVRK+L V+T+FNILGP
Sbjct:   34 EMSPVMIAAFAIGLRVKKETIGEIAAAAQVMREFATPVAVPDKTNLVDLCGTGGDGVHTFNISTASMFVAAAAGARVAKHGGRSVSSSSGSADVLEALGAHINLTPEQVAISLERCGIGFMFAPNHHASMKHAAPVRKELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DESRM (Anthranilate phosphoribosyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 72/177 (40.68%), Postives = 101/177 (57.06%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  +++ ++L+EAEA  ++  ++  +A +A I++ L  L  KGET  EI G AR M     +V+    + VD  GTGGDGANT NIST  + + A  G  VAK             DVLE LGV + L PE    C+D+ GI F+ +   H AMK+    RK++ ++TVFNILGP
Sbjct:    4 EAIQKVVAGINLSEAEAMETMQEVMEGKATQAQIASLLTALHLKGETVPEITGFARTMRTKVIRVQTKRRNLVDTCGTGGDGANTFNISTACAFVLAGAGLPVAKHGNRSVSSKCGSADVLEQLGVFVQLTPEEAGLCLDQVGIAFLFAPLLHGAMKYAAAPRKEIGIRTVFNILGP 180          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BURCA1.558e-2848.63Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BORPD1.558e-2847.02Anthranilate phosphoribosyltransferase OS=Bordetel... [more]
TRPD_XYLFT2.034e-2843.98Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_XYLF22.034e-2843.98Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_SULIY2.034e-2842.94Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIN2.034e-2842.94Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIL2.034e-2842.94Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_METMJ2.034e-2843.26Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_LEPCP2.034e-2846.36Anthranilate phosphoribosyltransferase OS=Leptothr... [more]
TRPD_DESRM2.034e-2840.68Anthranilate phosphoribosyltransferase OS=Desulfot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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