CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DEIGD (Anthranilate phosphoribosyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 76/167 (45.51%), Postives = 97/167 (58.08%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV--DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LT+AEA A +  ++        ++A L  LR +GET  EI G A+AM   A +V+     V  D+VGTGGDGA+T NIST  + + AA G  VAK             DVLEALGV +D  P+ V   V+E GIGFM +  YHPA++   PVR  L  +TVFNILGP
Sbjct:   26 LTQAEAAAFMHEVMEGNVSGVRLAAALAALRVRGETPEEIAGFAQAMRASAVRVQVAPREVLLDVVGTGGDGAHTFNISTTTAFVVAAAGVPVAKHGNRAASSRAGSADVLEALGVNLDAPPQLVADGVNELGIGFMFARNYHPALRHAAPVRADLAARTVFNILGP 192          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHOS5 (Anthranilate phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/165 (42.42%), Postives = 91/165 (55.15%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LT  EA+ + + L   EA  A +   L+ LR +GET  E    A  M     KV     A+DIVGTGGDG  T+NIST  + + A  G  VAK             D L  +G+ + + PE V  C+ EAGIGFMM+  +HPAM+ V PVR +L  +T+FNILGP
Sbjct:   17 LTREEAEFAFECLFEGEATPAQMGGLLMALRTRGETVDEYAAAATVMRAKCHKVRAPHGAIDIVGTGGDGKGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGAADALTEMGLNVMIGPERVEECLMEAGIGFMMAPMHHPAMRHVGPVRAELGTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PELPB (Anthranilate phosphoribosyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L+  L++  D ++ E    ++ +++    E +I+A L LL+ KG T  E  G   ++++ A  +E   +AVD  GTGGD A T NIST ASI+A + G ++AK             DVLEALG  IDL PE  +    E+G  F+ +  YHP+MK V PVR++L ++T+FNILGP
Sbjct:    5 KLLQKLLAGEDFSQEEMILCMNNIMDGLFSEMVIAALLALLQKKGVTPTETAGAYYSLMEKAVTIELDENAVDTCGTGGDHAGTFNISTTASIIANSAGVRIAKHGNRSVTSSCGSADVLEALGFTIDLPPEATKELFQESGFAFLFAPLYHPSMKRVAPVRRELGIRTIFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACCB (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei (strain BL23) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 72/176 (40.91%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I+ +++  +LT  E++A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A       D ++IVGTGGD ANT NIST ++I+ AA G +VAK             DVLEALG+ I+  P      + E  + F+ + +YH +MK+V PVRK+L  +T+FNILGP
Sbjct:    4 QAIEKVVNHENLTFEESEAVLDEIMNGEAYEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTQVAKHGNRAASSKSGAADVLEALGLDINETPAVSYESLQENNLAFLFAQEYHKSMKYVAPVRKQLGFRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSW (Anthranilate phosphoribosyltransferase OS=Geobacillus sp. (strain WCH70) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/178 (39.33%), Postives = 103/178 (57.87%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F +L+   I    LTE EA +A +  +  EA  + I++FL +LR +GET  E+ GL +AM      ++   +A+D  GTGGDGA+T NIST A+I+ ++ G KVAK             DVLEAL + I   PE  +R +   G+ F+ +  YH AMK+    RK++  +TVFN++GP
Sbjct:    2 FKQLLAKCIEGYTLTEEEAYEAMMMIMSGEASASQIASFLSILRLRGETVDELTGLVKAMRNRMMTLDYEEEAIDTCGTGGDGASTFNISTAAAIVVSSLGVKVAKHGNRAVSSKSGSADVLEALHIDIQATPEEAKRALKTKGLAFLFAPLYHSAMKYAALPRKEIGFRTVFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOKA (Anthranilate phosphoribosyltransferase OS=Geobacillus kaustophilus GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM      +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH AMK     RK++  +TVFN++GP
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIQTSPSAAKQALETKGLAFLFAPLYHAAMKHAAGPRKEIGFRTVFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_EUBR3 (Anthranilate phosphoribosyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 77/179 (43.02%), Postives = 106/179 (59.22%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLR---AKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  ++++ DLT  EA A ++ ++  E      +AFL  L    AK ET  EI G A AM ++A +V+   D  +IVGTGGD A + NIST ++++AAA G KVAK             D LEALGV ID  PE     +++ G+ F  + KYH +MK+V P+RK+L  +TVFNILGP
Sbjct:    4 EAIVKIVNKEDLTYDEAYAVMNEIMGGETTSTQNAAFLAALSTKSAKAETTDEIAGCAAAMREHAVQVKTGMDVFEIVGTGGDNAQSFNISTTSALVAAAGGMKVAKHGNRAASSLCGTADCLEALGVNIDQSPEKCVELLNKVGMCFFFAQKYHTSMKYVGPIRKELGFRTVFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCR (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L  E   A ++A +  +R +GET GEI   ARAM + A  +E   D +D+ GTGGDG +T+NIST    +AA  G KVAK             DVL ALGV ID   E  R+ +DEAGI F+ +  +H AMK V P+R++L  +T+FN+LGP
Sbjct:   31 LRGEPTPAQVAAAVTAIRLRGETVGEIAACARAMRRAAIPLEHPYDVIDVCGTGGDGLHTLNISTAVGFVAAGGGLKVAKHGNRAITSKSGTADVLTALGVNIDATREQQRKALDEAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCN (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L  E   A ++A +  +R +GET GEI   ARAM + A  +E   D +D+ GTGGDG +T+NIST    +AA  G KVAK             DVL ALGV ID   E  R+ +DEAGI F+ +  +H AMK V P+R++L  +T+FN+LGP
Sbjct:   31 LRGEPTPAQVAAAVTAIRLRGETVGEIAACARAMRRAAIPLEHPYDVIDVCGTGGDGLHTLNISTAVGFVAAGGGLKVAKHGNRAITSKSGTADVLTALGVNIDATREQQRKALDEAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURS3 (Anthranilate phosphoribosyltransferase OS=Burkholderia sp. (strain 383) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  + V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DEIGD2.034e-2845.51Anthranilate phosphoribosyltransferase OS=Deinococ... [more]
TRPD_RHOS53.470e-2842.42Anthranilate phosphoribosyltransferase OS=Rhodobac... [more]
TRPD_PELPB3.470e-2839.77Anthranilate phosphoribosyltransferase OS=Pelodict... [more]
TRPD_LACCB3.470e-2840.91Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_GEOSW3.470e-2839.33Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_GEOKA3.470e-2839.39Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_EUBR33.470e-2843.02Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_CAUCR3.470e-2844.74Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_CAUCN3.470e-2844.74Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_BURS33.470e-2847.95Anthranilate phosphoribosyltransferase OS=Burkhold... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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