CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYXXD (Anthranilate phosphoribosyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 71/177 (40.11%), Postives = 96/177 (54.24%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E +  ++ R DLT  E    +  +L  EA  A + A    L+ KGET  EI+G A AM   AAK+    D V D  GTGGDGA+T NIST  + +AA  G  VAK             DVL ALGV ++   E V R +DE G+GF+ +  +H A++ V   R+ +   +VFN+LGP
Sbjct:    5 EALGKVVGRRDLTREEMTRIMGLMLAGEASPAQVGALATALKMKGETEDEILGAAEAMRACAAKLSPRADVVLDTCGTGGDGAHTFNISTAVAFVAAGAGVTVAKHGNRAVSSRCGSADVLAALGVSMERPHERVARDIDEHGVGFLFAPSHHGALRHVAQARRDMGFHSVFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACWK (Anthranilate phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 71/178 (39.89%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E  +A L  L +   E+ ++AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA++ +  +RK+L V T+FN++GP
Sbjct:    2 NSYLRKLVEGQHLTEEEMYEAGLLLLSDNILESEVAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIKGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISCTPGEIDYLLENVGIAFLFAPAMHPALRRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACCR (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+  +  +RK+L V T+FN++GP
Sbjct:    2 NSYLRKLVEGKHLTEEEMYRAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPSEIDYLLEHVGIAFLFAPAMHPALTRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACC2 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain G9842) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E  +A L  L     E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA++ +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLSENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALRRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACTPJ (Anthranilate phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLL--NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++  L     LT+AE+Q   + ++  N ++E L  A L+ L+ +GET  EI G   A    A        A  DIVGTGGDG NT+NIST ++I+AA  G KVAK             DVL ALG+ + + P+  R+ +DE  + F+ +  YH   K   PVR+ LK +T+FNILGP
Sbjct:    4 DNILSQLFENQALTKAESQYFFEQVIQGNVSNEQLAGA-LIALKVRGETIEEIAGAVEAAFANATAFPAPDYAFADIVGTGGDGQNTINISTASAIVAATLGYKVAKHGSRSVSSKTGASDVLSALGINVTISPQTARQALDENNLCFLFAPLYHAGFKHAVPVRQTLKTRTLFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACTP2 (Anthranilate phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLL--NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++  L     LT+AE+Q   + ++  N ++E L  A L+ L+ +GET  EI G   A    A        D  DIVGTGGDG NT+NIST ++I+AA  G KVAK             DVL ALG+ + + P+  R+ +DE  + F+ +  YH   K   PVR+ LK +T+FNILGP
Sbjct:    4 DNILSQLFENQALTKAESQYFFEQVIQGNVSNEQLAGA-LIALKVRGETIEEIAGAVEAAFANATTFPTPDYDFADIVGTGGDGQNTINISTASAIVAATLGYKVAKHGSRSVSSKTGASDVLSALGINVAISPQTARQALDENNLCFLFAPLYHAGFKHAVPVRQTLKTRTLFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SHEAM (Anthranilate phosphoribosyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L+D       L+  EA+     L+  E DE  I+A L+ L+ +GET  EI G A AM + A         G  +DIVGTGGDG NT+NIST A+ +AAA GA VAK             D+L   G+ + + P+    C++  GI F+ +  YH  +K   PVR+KL  +T+FN+LGP
Sbjct:    7 QLLDKTYGGNPLSREEAKCLFASLVRGELDEVTIAALLMALKVRGETIDEISGAADAMREAANSFPRPALDGGILDIVGTGGDGFNTINISTTATFVAAAAGANVAKHGNRSVSSKSGSSDLLGQFGIELTMAPQTAANCLEALGICFLFAPHYHGGVKHAVPVRQKLATRTLFNVLGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PYRIL (Anthranilate phosphoribosyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  239 SLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            S + L    ++  ++A L  +R +GET  E+ G  ++  + A KV    +A+D  GTGGDGA T+N+ST A+++AAA GA+V K             D +EA+G  +++ PE     V++ G  F+ + +YHPA   V PVR++L  +TVFNI+GP
Sbjct:   23 SREILSGGLNDVAVAAALTAMRCRGETAEEVTGFVKSAREVAVKVPLRVEAIDTAGTGGDGAGTINLSTLAAVVAAAAGARVLKHGNRSASGFFGSADFMEAVGYNLEVGPEKAAEMVEKIGFAFVFAPRYHPAFAKVAPVRRQLPFRTVFNIVGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HAEIN (Anthranilate phosphoribosyltransferase OS=Haemophilus influenzae GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 68/178 (38.20%), Postives = 102/178 (57.30%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+L++ L S   L+ +E+ A  + ++  E     I+A L+ L+ +G    EI G   A ++ A           DIVGTGG+G NT+NIST ++I+AA+ GAK+AK             DVL AL V +++ PE  R+ +DE G+ F+ + +YH   + V PVR  LK +T+FNILGP
Sbjct:    4 NQLLEQLYSGHSLSTSESTALFNAVIQGELSNEQIAAMLIALKVRGANTEEISGAVAASLQNAKAFPYPNYPFADIVGTGGNGQNTINISTTSAIVAASMGAKIAKHGNRSVSSKSGASDVLTALSVNVNVTPEQARQALDEIGVCFLFAQQYHSGFRHVAPVRAALKTRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CAUSK (Anthranilate phosphoribosyltransferase OS=Caulobacter sp. (strain K31) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L  E   A ++A +  +R +GET GEI   ARAM + A  ++   + +D+ GTGGDG +T+NIST    +AA  G KVAK             DVL ALGV ID      R  +D AGI F+ +  +H AMK V P+R++L  +T+FN+LGP
Sbjct:   31 LRGEPTPAQVAAAVTAMRLRGETVGEITACARAMRRAAIHLDHPYEVIDVCGTGGDGLHTLNISTAVGFVAAGGGLKVAKHGNRAITSKSGTADVLAALGVNIDASLAQQRHALDTAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGP 182          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MYXXD7.236e-2640.11Anthranilate phosphoribosyltransferase OS=Myxococc... [more]
TRPD_BACWK7.236e-2639.89Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACCR7.236e-2641.01Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACC27.236e-2640.45Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_ACTPJ7.236e-2639.11Anthranilate phosphoribosyltransferase OS=Actinoba... [more]
TRPD_ACTP27.236e-2639.11Anthranilate phosphoribosyltransferase OS=Actinoba... [more]
TRPD_SHEAM9.450e-2639.11Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_PYRIL9.450e-2637.82Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]
TRPD_HAEIN9.450e-2638.20Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_CAUSK9.450e-2642.11Anthranilate phosphoribosyltransferase OS=Caulobac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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