CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PYRAR (Anthranilate phosphoribosyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++A L  +R +GE+  E+ G  +   ++A +V    +AVD  GTGGDGA T+N+ST A+I+AAA GAKV K             D +EA+G  +++ PE     V++ G  F+ + +YHPA   V PVR+ L  +T+FNI+GP
Sbjct:   38 VAASLTAMRVRGESPEEVAGFVKMAREFAVRVPLRIEAVDTAGTGGDGAGTINLSTAAAIVAAAAGAKVLKHGNRSASGLFGSADFMEAVGYNLEVGPEKAAELVEKVGFAFVFAPRYHPAFAKVAPVRRALPFRTIFNIVGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_IGNH4 (Anthranilate phosphoribosyltransferase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQA-SLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L++ ++    L+  EA A ++    NE D+   + FLV LR   E   E+ G  RA++  A KV    +A+D  GTGGD AN  N+ST A++  AA G KV K             DV+EALG  ++L PE      +  G  ++ +  YHPAMK V  VRK L ++T+FN+ GP
Sbjct:    6 LLEKILRGERLSSEEAYALAMSIAKNEIDDVQKAGFLVALRCGRERPEELEGFVRALLDLAVKVGPFREAIDTAGTGGDRANLFNVSTAAAVTLAAMGYKVVKHGNRSVTSAAGSADVMEALGYNLNLPPEKATEVFERTGFVYLFAPLYHPAMKNVAHVRKNLGIRTIFNLAGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GLOVI (Anthranilate phosphoribosyltransferase OS=Gloeobacter violaceus GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYA-AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+ C +    L+E  A+  ++ +L  E   AL  A LV +     T GE+  +A+ + + A A   GL   +D  GTGGDG  T NIST  + +AAACG  VAK             DVLE LGV +  +   VR  +D  GI F+ +  +HPA+K V PVR++L ++TVFN+LGP
Sbjct:   10 LLICRLGGAALSEEAARELMEAWLAGEVPAALSGALLVAIAPLAITAGELAAMAKTLQEAAGAAPTGLPVLLDTCGTGGDGLGTFNISTAVAFVAAACGVPVAKHGARSASSRVGSADVLEHLGVHLSQERARVRAALDAVGITFLFAPGWHPALKAVAPVRRELGIRTVFNLLGP 185          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLTE (Anthranilate phosphoribosyltransferase OS=Chlorobium tepidum GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E++  L+   DL+  E +  ++ ++ N   +A   A L LL+ KG T  E++G   +++  +  V     AVD  GTGGD   T NIST A+ +A   G  +AK             DVLEALG  +DL P        E G  F+ +  YHP+MK V  +RK+L +KT+FN+LGP
Sbjct:    5 EILQKLLEGHDLSRQEMETCMNSIMENRFTDAGTGAILALLQKKGATPAEVIGACASIVSKSTPVTLDQQAVDTCGTGGDHTGTFNISTAAAFIACGAGIPIAKHGNRSITSKCGSADVLEALGYQVDLPPCATEELFRETGFAFLFAPLYHPSMKAVAAIRKELGIKTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AERPE (Anthranilate phosphoribosyltransferase OS=Aeropyrum pernix GN=trpD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  L+    LT  EA      +L+ + D +L +A L  LR +GE  GE+VG ARA+   A +VE  G+ + D  GTGGDG +T+N ST A+++AA+ G   AK             DV+E LG  I+   +   R +   G  F+ +  YHPAMK V PVR+KL  +T+FN++GP
Sbjct:   12 LVKKLLEGEPLTPGEAAQLAQAMLDPSFDNSLKAAALAALRVRGEQPGEVVGFARALRDRAVRVEYGGEVLLDTAGTGGDGLSTLNASTAAALVAASLGVPTAKHGNRSFSSKSGSADVMEMLGYNINHRADRAVRMLSTLGFTFLYAPNYHPAMKAVVPVRRKLATRTIFNLVGP 187          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPG_THEMA (Anthranilate synthase component II OS=Thermotoga maritima GN=trpGD PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+   DLT  E++  ++++++  A +A I+ FLV LR K ET  E+ G+A  M + +  ++      VD  GTGGDG  T NIST  + + AA G  VAK             DVLEA G  ++  PE + R + E G  F+ +   HPAMK V P R++LK++T FN+LGP
Sbjct:  257 LVEFEDLTFEESRQVMNFIMSGNATDAQIAGFLVALRMKEETGDELGGMASVMREKSIHIKAPSPRTVDTCGTGGDGFGTFNISTTTAFVVAAAGIPVAKHGNRSVSSKVGSADVLEAGGYKLEKTPEEMERELKETGFSFLFAPLLHPAMKHVMPARRQLKIRTAFNLLGP 428          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PERMH (Anthranilate phosphoribosyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DL+  E +   + L+  +A +A I A L+ L+ KGE+  EI   A+ M + A KV  +     +D  GTGGD  +T N+ST  + + A  G KVAK             D++EALGV IDL PE     +D  G+GF+ +  YHPAMK V   R+++ V+T+FNILGP
Sbjct:   14 DLSADEMKDLFNILMEGQATDAQIGAVLIGLKMKGESVEEISSAAQIMREKAVKVPVKDRSRLIDTCGTGGDKVDTFNVSTITAFVIAGAGVKVAKHGNRSVSSKCGSADIMEALGVKIDLSPEQAAEAIDRIGLGFLFAPVYHPAMKNVIRQRREIGVRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MANSM (Anthranilate phosphoribosyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 62/150 (41.33%), Postives = 86/150 (57.33%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E     ++  L+ L+ +GET  EI G   A++  A           DIVGTGGD A+T+NIST ++I+AA+ G K+AK             DVL ALGV I +  E  R+ +DE GI F+ + +YH   K+  PVR+ LK +T+FNILGP
Sbjct:   41 ELSNEQLAGALIALKIRGETIDEITGAVTALLAAAEPFPAPDYPFADIVGTGGDNADTINISTASAIVAASMGLKIAKHGNRSVSSKTGASDVLTALGVNIRMSTEQARKALDEIGIAFIFAQQYHLGFKYAGPVRQALKTRTIFNILGP 190          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HELPS (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain Shi470) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+++ L  + DL + E +     ++NE    A + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH + K   P+RK+L  KT+FN LGP
Sbjct:    3 EILNALYHQKDLNDGEVKKLFTLIINEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFDSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPTQLENCFKQTHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_FRAP2 (Anthranilate phosphoribosyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=trpD PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25
Identity = 63/177 (35.59%), Postives = 99/177 (55.93%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++++ L +  DL   E+    DY +  + +  L ++ L+ L+ K ET  EI     A++    +   + GD   IVGTGGDG NT+NIST A+I+AAA G KVAK             D+LE+ GV I+L P+  + C++   +GF+ +  Y    ++++  R  LK +T+FNILGP
Sbjct:    6 DIVEKLFNSEDLNYKESYQLFDYFIKGQIELPLQTSILIALKLKQETSTEIAAAVEALLDNTKEFPKINGDLAGIVGTGGDGFNTINISTTAAIVAAAAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELSPQQTKECLELYNLGFLFAPFYSEGFRYIKEARTILKTRTIFNILGP 182          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PYRAR3.591e-2539.86Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]
TRPD_IGNH43.591e-2537.71Anthranilate phosphoribosyltransferase OS=Ignicocc... [more]
TRPD_GLOVI3.591e-2539.20Anthranilate phosphoribosyltransferase OS=Gloeobac... [more]
TRPD_CHLTE3.591e-2536.36Anthranilate phosphoribosyltransferase OS=Chlorobi... [more]
TRPD_AERPE3.591e-2539.20Anthranilate phosphoribosyltransferase OS=Aeropyru... [more]
TRPG_THEMA6.125e-2538.95Anthranilate synthase component II OS=Thermotoga m... [more]
TRPD_PERMH6.125e-2539.88Anthranilate phosphoribosyltransferase OS=Persepho... [more]
TRPD_MANSM6.125e-2541.33Anthranilate phosphoribosyltransferase OS=Mannheim... [more]
TRPD_HELPS6.125e-2536.16Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_FRAP26.125e-2535.59Anthranilate phosphoribosyltransferase OS=Francise... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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