DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ACISJ (Chaperone protein dnaK OS=Acidovorax sp. (strain JS42) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 5.194e-76
Identity = 143/217 (65.90%), Postives = 174/217 (80.18%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +D+ +LVGGMTR+PKVQE V E FGK P K VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK +Q FSTA DNQ  V IKV QGERE+AS NK LGEF L GIPPA RG PQIEVTFDIDANGI+ V AKDK TGKE +ITI+++ GLSEDEI+KMVK+AEL+A  D ++  L+  RNQ +  ++++ + L
Sbjct:  335 IDDVILVGGMTRMPKVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTAEDNQPAVTIKVFQGEREIASANKLLGEFNLEGIPPASRGTPQIEVTFDIDANGILHVGAKDKGTGKENKITIKANSGLSEDEIQKMVKDAELNAADDKKKLELVQARNQGEAAVHTVTKSL 551          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAC (Chaperone protein dnaK OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 5.194e-76
Identity = 144/217 (66.36%), Postives = 175/217 (80.65%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            + + +LVGGMTR+PKVQE V E FGK P K VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK +Q FSTA DNQ  V IKV QGERE+AS NK LGEF L GIPPA RG+PQIEVTFDIDANGI+ VSAKDK TGKE +ITI+++ GLSEDEI+KMVK+AEL+A  D ++  L+  RNQ +  ++S+ + L
Sbjct:  335 IHDVILVGGMTRMPKVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTADDNQPAVTIKVFQGEREIASANKLLGEFNLEGIPPAGRGVPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSGLSEDEIQKMVKDAELNAADDKKKLELVQARNQGEAAVHSVTKSL 551          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SULMW (Chaperone protein dnaK OS=Sulcia muelleri (strain GWSS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 6.784e-76
Identity = 141/217 (64.98%), Postives = 179/217 (82.49%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+PK+QE V + F K PSKGVNPDE V++GAAIQGG+L  DVK++LLLDVTPLSLGIETLGG+FT+LI+ NTTIPTKKS++FSTA DNQ+ V I+V QGER M +DNK +G F+L+ I PAPRG+PQIEVTFDIDANGI+ VSAKDK+TGKEQ I I++S GLS++EIE+M KEA+ +A +DN+ K  I+  N AD+ I+   ++L
Sbjct:  328 IDEVILVGGSTRIPKIQEQVEKFFEKIPSKGVNPDEVVSIGAAIQGGVLSGDVKDVLLLDVTPLSLGIETLGGVFTKLIDSNTTIPTKKSEIFSTATDNQSAVTIRVGQGERSMFNDNKEIGRFDLIDIAPAPRGIPQIEVTFDIDANGILNVSAKDKSTGKEQSIRIQASSGLSKNEIERMKKEAQENADKDNKIKEEIEKINSADSIIFQTEKQL 544          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LYSSC (Chaperone protein dnaK OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 6.784e-76
Identity = 140/213 (65.73%), Postives = 171/213 (80.28%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE V +   K P +GVNPDE VA+GAA+QGG+L  DVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTIPT KSQVFSTAADNQ  V I VLQGER MA+DNK+LG F+L  IPPAPRG+PQIEVTFDID NGIV+V AKD  T KEQ I I+S  GLSE EIE+MVK+AE +A  D +RK   D+RN+AD  ++ +
Sbjct:  304 IDQVILVGGSTRIPAVQEAVRKETNKEPHRGVNPDEVVAMGAAVQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERSMAADNKTLGRFQLADIPPAPRGVPQIEVTFDIDKNGIVSVKAKDLGTNKEQTIVIQSDSGLSEAEIERMVKDAEANADADAKRKEEADLRNEADQLVFQV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_JANMA (Chaperone protein dnaK OS=Janthinobacterium sp. (strain Marseille) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 6.784e-76
Identity = 142/212 (66.98%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGGMTR+PKVQE V + FGK P K VNPDEAVA+GAAIQG +L  D K+LLLLDVTPLSLGIETLGG+ T++I +NTTIPTK SQVFSTA DNQ  V IKV QGEREMA  NK+LGEF L GIPP+ RG PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GL+E+EI+KMV++AE +A+ D   K L +  NQ D  ++S
Sbjct:  335 IDDIILVGGMTRMPKVQETVKDFFGKDPRKDVNPDEAVAVGAAIQGSVLSGDRKDLLLLDVTPLSLGIETLGGVMTKMIQKNTTIPTKFSQVFSTADDNQPAVTIKVFQGEREMAVGNKALGEFNLEGIPPSARGTPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLTEEEIQKMVQDAEANAEEDKRLKELAEAHNQGDALVHS 546          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ENTFA (Chaperone protein dnaK OS=Enterococcus faecalis GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 6.784e-76
Identity = 140/213 (65.73%), Postives = 173/213 (81.22%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +DE +LVGG TR+P V E V +   K P+K VNPDE VA+GAAIQGG++  DVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTIPT KSQVFSTAADNQ  V I VLQGER MA+DNK+LG F+L  IP APRG+PQIEV+FDID NGIV V AKD  T KEQ ITI+SS GLS+DEIE+MVK+AE +A+ D +RK  +D+RN AD  ++++
Sbjct:  305 IDEVILVGGSTRIPAVVEAVRKETNKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVSFDIDKNGIVNVRAKDLGTQKEQTITIKSSSGLSDDEIERMVKDAEANAEADKQRKEEVDLRNDADALLFTV 517          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BACWK (Chaperone protein dnaK OS=Bacillus weihenstephanensis (strain KBAB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 6.784e-76
Identity = 139/211 (65.88%), Postives = 172/211 (81.52%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D+ +LVGG TR+P VQE +    GK P KGVNPDE VALGAA+QGG+L  DV+ +LLLDVTPLSLGIET+GG+FT+LI RNTTIPT KSQVFSTAADNQ  V I VLQGER M++DNK+LG F+L  +PPAPRG+PQIEVTFDIDANGIV V AKD  T KEQ ITI+SS GLS++E+++MV+EAE +A  D +RK  +++RN+AD  ++
Sbjct:  304 LDKVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVEGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMSADNKTLGRFQLTDLPPAPRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQTITIQSSSGLSDEEVDRMVQEAESNADADQKRKEEVELRNEADQLVF 514          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SULNB (Chaperone protein dnaK OS=Sulfurovum sp. (strain NBC37-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 7.548e-76
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            V E ++VGG TRVP VQE V + F K  +K VNPDE VALGAAIQGG+L  DVK++LLLDVTPLSLGIETLGG+ T++I + TTIP KKSQ+FSTA DNQ  V I VLQGERE A DNKSLG FEL  IP APRG+PQIEVTFDIDANGI+TVSA DK TGK Q+I I  S GLS++EIEKMV++AE H   D +RKA+++ +NQAD  I+
Sbjct:  328 VKEVVMVGGSTRVPLVQEEVKKFFNKELNKSVNPDEVVALGAAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVMTKVIEKGTTIPAKKSQIFSTAEDNQPAVSIHVLQGEREFAKDNKSLGMFELRDIPAAPRGVPQIEVTFDIDANGILTVSAVDKGTGKSQEIKITGSSGLSDEEIEKMVQDAEAHKAEDEKRKAVVEAKNQADALIH 538          

HSP 2 Score: 25.7942 bits (55), Expect = 7.548e-76
Identity = 16/51 (31.37%), Postives = 26/51 (50.98%), Query Frame = 2
Query:  641 EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSK 793
            +KSL +  E   +     IE A+ADL   +  DN    K ++D   KA+++
Sbjct:  541 KKSLDDLGENFDANEKAGIEAAIADLETVLKDDNA--TKEQIDEKVKALTE 589          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_TERTT (Chaperone protein dnaK OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 140/212 (66.04%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAAIQG +L  DVK++LLLDVTPL+LGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQT V I V+QGER+ A+ NKSLG F+L  IPPAPRGMPQ+EVTFDIDANGI+ VSAKDKATGKEQ I I++S GLS+DEIE MVK+AE +A+ D + + L+  RN  +  +++
Sbjct:  334 IDDVILVGGQTRMPLVQQKVAEFFGKEPRKDVNPDEAVAMGAAIQGAVLSGDVKDVLLLDVTPLTLGIETMGGVATPLIEKNTTIPTKKSQVFSTAEDNQTAVTIHVVQGERKQAAQNKSLGRFDLADIPPAPRGMPQVEVTFDIDANGILNVSAKDKATGKEQSIVIKASSGLSDDEIENMVKDAEANAEADRKFEELVSARNTLEGLVHA 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALAR (Chaperone protein dnaK OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/212 (66.51%), Postives = 178/212 (83.96%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI++NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +GKEQ+ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQ D  ++S
Sbjct:  334 INDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTPLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAESDRKFEELVQTRNQGDHLLHS 545          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ACISJ5.194e-7665.90Chaperone protein dnaK OS=Acidovorax sp. (strain J... [more]
DNAK_ACIAC5.194e-7666.36Chaperone protein dnaK OS=Acidovorax avenae subsp.... [more]
DNAK_SULMW6.784e-7664.98Chaperone protein dnaK OS=Sulcia muelleri (strain ... [more]
DNAK_LYSSC6.784e-7665.73Chaperone protein dnaK OS=Lysinibacillus sphaericu... [more]
DNAK_JANMA6.784e-7666.98Chaperone protein dnaK OS=Janthinobacterium sp. (s... [more]
DNAK_ENTFA6.784e-7665.73Chaperone protein dnaK OS=Enterococcus faecalis GN... [more]
DNAK_BACWK6.784e-7665.88Chaperone protein dnaK OS=Bacillus weihenstephanen... [more]
DNAK_SULNB7.548e-7667.30Chaperone protein dnaK OS=Sulfurovum sp. (strain N... [more]
DNAK_TERTT8.860e-7666.04Chaperone protein dnaK OS=Teredinibacter turnerae ... [more]
DNAK_SALAR8.860e-7666.51Chaperone protein dnaK OS=Salmonella arizonae (str... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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