DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/211 (66.82%), Postives = 176/211 (83.41%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            V++ +LVGG TR+P VQ+ V+E FGK P K VNPDEAVA+GAA+QGG+L  DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTK SQVFSTA DNQ+ V I VLQGER+ ASDNKSLG+F L GI PAPRGMPQIEVTFDIDA+GI+ VSAKDK +G+EQ ITI++S GL+E+EI+KMV++AE +A+ D + + L+  RNQAD  ++
Sbjct:  334 VNDVILVGGQTRMPMVQKTVAEFFGKEPRKDVNPDEAVAMGAAVQGGVLAGDVKDVLLLDVTPLSLGIETMGGVMTSLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRASDNKSLGQFNLDGIQPAPRGMPQIEVTFDIDADGILHVSAKDKNSGREQNITIKASSGLNEEEIQKMVRDAEANAEADRKFEELVQTRNQADQLVH 544          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 142/217 (65.44%), Postives = 175/217 (80.65%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+PKVQ +V + FGK P+K VNPDE VA+GAAIQGG+L+ DV ++LLLDVTPLSLGIETLGG+ T+LI+ NTTIPT+K +VFSTA DNQT V + VLQGER MA+DNK+LG F L  IPP+PRG+PQIEVTFDID+NGI+ VSAKDKATGKEQ I I SS  L++ EI KM ++A+ HA  D +RK  ID RN AD+ I+S  ++L
Sbjct:  327 IDEVVLVGGSTRIPKVQALVKDFFGKEPNKSVNPDEVVAIGAAIQGGVLKGDVTDVLLLDVTPLSLGIETLGGVMTKLIDANTTIPTRKQEVFSTAGDNQTSVEVHVLQGERPMATDNKTLGRFHLGDIPPSPRGIPQIEVTFDIDSNGILHVSAKDKATGKEQSIKIESSSKLTDAEISKMKEDAKEHAAEDQKRKEEIDTRNIADSLIFSTEKQL 543          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_PEDPA (Chaperone protein dnaK OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 142/226 (62.83%), Postives = 180/226 (79.65%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EELG*VQRKDSQ 678
            +DE +L GG TR+P VQE V    GK P+  +NPDEAVALGAA+QGG+L  DVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTIPT KSQVFSTAADNQ  V I VLQGER MA+DNK+LG F+L  IP APRG+PQIEV FDID NGIV VSA DK TGKEQ+ITI+SS GLS++EI++M+KEA+ + + D +RK  +D+RN+ D  I++  + L  ++ K S+
Sbjct:  307 IDEVILNGGSTRIPAVQEAVKNWTGKEPNHSINPDEAVALGAAVQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVKFDIDKNGIVNVSATDKGTGKEQKITIKSSSGLSDEEIDRMMKEAKENEEADKKRKEEVDLRNEVDQLIFTTDKTLKDLEGKVSE 532          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CELJU (Chaperone protein dnaK OS=Cellvibrio japonicus (strain Ueda107) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 142/212 (66.98%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAAIQG +L  DVK++LLLDVTPL+LGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQT V I V+QGER+ AS NKSLG F+L  IPPAPRGMPQIEVTFDIDANGI+ VSAKDKATGKEQ I I++S GLS+DEI+KMVK+AE +A+ D +   L+  RN  +  I++
Sbjct:  334 IDDVILVGGQTRMPLVQKAVADYFGKEPRKDVNPDEAVAIGAAIQGAVLAGDVKDVLLLDVTPLTLGIETMGGVATPLIEKNTTIPTKKSQVFSTADDNQTAVTIHVVQGERKQASQNKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILNVSAKDKATGKEQSIVIKASSGLSDDEIQKMVKDAEANAEADRKFAELVGARNTLEGLIHA 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CARHZ (Chaperone protein dnaK OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 140/211 (66.35%), Postives = 170/211 (80.57%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D+ LLVGG TR+P VQE + + F K P KG+NPDE VA+GAAIQ  +L  +VK+++LLDVTPLSLGIETLGG+FT+LI RNTTIPT KSQ+F+TAADNQT V I VLQGER MA+DN SLG F L GIPPAPRG+PQIEV FDID NGIV VSAKD  TG+EQ ITI ++  LSE EI++MV+EAE +A+ D +RK  ++ RNQAD+ IY
Sbjct:  305 IDKILLVGGSTRIPAVQEAIRKFFNKEPHKGINPDECVAIGAAIQAAVLAGEVKDVVLLDVTPLSLGIETLGGVFTKLIERNTTIPTSKSQIFTTAADNQTSVEIHVLQGERPMAADNVSLGRFTLTGIPPAPRGVPQIEVRFDIDVNGIVHVSAKDLGTGREQSITITNTSNLSEAEIKRMVEEAERYAEEDRKRKEEVETRNQADSLIY 515          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/212 (66.51%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+PKV E V E FGK P + VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++IN+NTTIPTK +QV+STA DNQ  V IKV QGEREMA+ NK LGEF L GIPPAPRG+PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GLSE EI++M+K+AE +A  D++ + L D RNQ D  ++S
Sbjct:  335 IDDVILVGGQTRMPKVMEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHS 546          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BURCH (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain HI2424) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/212 (66.51%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+PKV E V E FGK P + VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++IN+NTTIPTK +QV+STA DNQ  V IKV QGEREMA+ NK LGEF L GIPPAPRG+PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GLSE EI++M+K+AE +A  D++ + L D RNQ D  ++S
Sbjct:  335 IDDVILVGGQTRMPKVMEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHS 546          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BURCC (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain MC0-3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/212 (66.51%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+PKV E V E FGK P + VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++IN+NTTIPTK +QV+STA DNQ  V IKV QGEREMA+ NK LGEF L GIPPAPRG+PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GLSE EI++M+K+AE +A  D++ + L D RNQ D  ++S
Sbjct:  335 IDDVILVGGQTRMPKVMEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHS 546          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BURCA (Chaperone protein dnaK OS=Burkholderia cenocepacia (strain AU 1054) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/212 (66.51%), Postives = 173/212 (81.60%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+PKV E V E FGK P + VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++IN+NTTIPTK +QV+STA DNQ  V IKV QGEREMA+ NK LGEF L GIPPAPRG+PQIEVTFDIDANGI+ V AKDKATGKE +ITI+++ GLSE EI++M+K+AE +A  D++ + L D RNQ D  ++S
Sbjct:  335 IDDVILVGGQTRMPKVMEKVKEFFGKDPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMINKNTTIPTKHAQVYSTADDNQGAVTIKVFQGEREMAAGNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVGAKDKATGKENKITIKANSGLSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHS 546          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_ACTPJ (Chaperone protein dnaK OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=dnaK PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 8.860e-76
Identity = 141/207 (68.12%), Postives = 174/207 (84.06%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            +++ +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ AS NKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EIE+MV++AE +A+ D + + L+  RNQAD
Sbjct:  333 INDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTVLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKQASANKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIEQMVRDAEANAEADKKFEELVQARNQAD 539          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PROMH8.860e-7666.82Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_PELPB8.860e-7665.44Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_PEDPA8.860e-7662.83Chaperone protein dnaK OS=Pediococcus pentosaceus ... [more]
DNAK_CELJU8.860e-7666.98Chaperone protein dnaK OS=Cellvibrio japonicus (st... [more]
DNAK_CARHZ8.860e-7666.35Chaperone protein dnaK OS=Carboxydothermus hydroge... [more]
DNAK_BURCJ8.860e-7666.51Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_BURCH8.860e-7666.51Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCC8.860e-7666.51Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_BURCA8.860e-7666.51Chaperone protein dnaK OS=Burkholderia cenocepacia... [more]
DNAK_ACTPJ8.860e-7668.12Chaperone protein dnaK OS=Actinobacillus pleuropne... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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