DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 145/218 (66.51%), Postives = 173/218 (79.36%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EELG 654
            + + +LVGGMTR+PKVQE V E FGK   K VNPDEAVA+GAAIQG +L  D  ++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK SQ FSTA DNQ  V IKV QGEREMAS NK LGEF L GIPPAPRG PQIEV+FDIDANGI+ V AKDKATGKE +ITI++S GLSE EIE+MVK+AE +A+ D + + L+D RNQ +  ++S  + LG
Sbjct:  335 IHDVILVGGMTRMPKVQEKVKEFFGKEARKDVNPDEAVAVGAAIQGQVLGGDRTDVLLLDVTPLSLGIETLGGVMTKMIGKNTTIPTKFSQTFSTADDNQPAVTIKVYQGEREMASGNKMLGEFNLEGIPPAPRGTPQIEVSFDIDANGILHVGAKDKATGKENKITIKASSGLSEAEIERMVKDAEANAEEDKKLRELVDSRNQGEALVHSTKKALG 552          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LISMO (Chaperone protein dnaK OS=Listeria monocytogenes GN=dnaK PE=2 SV=4)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE + +  GK P KGVNPDE VA+GAAIQGG++  DVK+++LLDVTPLSLGIET+GG+ T LI RNTTIPT KSQ FSTAADNQ  V I VLQGER MA DNK+LG F+L  IPPAPRG+PQIEV+FDID NGIVTV AKD  TGKEQ I I+SS GL+++EIEKMV++AE +A+ D + K   ++RN AD  ++++
Sbjct:  304 IDQVILVGGSTRIPAVQETIKKELGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSKSQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDKNGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNNADQLVFTV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LISMF (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaK PE=2 SV=3)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE + +  GK P KGVNPDE VA+GAAIQGG++  DVK+++LLDVTPLSLGIET+GG+ T LI RNTTIPT KSQ FSTAADNQ  V I VLQGER MA DNK+LG F+L  IPPAPRG+PQIEV+FDID NGIVTV AKD  TGKEQ I I+SS GL+++EIEKMV++AE +A+ D + K   ++RN AD  ++++
Sbjct:  304 IDQVILVGGSTRIPAVQETIKKELGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSKSQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDKNGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNNADQLVFTV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LISMC (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE + +  GK P KGVNPDE VA+GAAIQGG++  DVK+++LLDVTPLSLGIET+GG+ T LI RNTTIPT KSQ FSTAADNQ  V I VLQGER MA DNK+LG F+L  IPPAPRG+PQIEV+FDID NGIVTV AKD  TGKEQ I I+SS GL+++EIEKMV++AE +A+ D + K   ++RN AD  ++++
Sbjct:  304 IDQVILVGGSTRIPAVQETIKKELGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSKSQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDKNGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNNADQLVFTV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_LISIN (Chaperone protein dnaK OS=Listeria innocua GN=dnaK PE=2 SV=3)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 137/213 (64.32%), Postives = 170/213 (79.81%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE + +  GK P KGVNPDE VA+GAAIQGG++  DVK+++LLDVTPLSLGIET+GG+ T LI RNTTIPT KSQ FSTAADNQ  V I VLQGER MA DNK+LG F+L  IPPAPRG+PQIEV+FDID NGIVTV AKD  TGKEQ I I+SS GL+++EIEKMV++AE +A+ D + K   ++RN AD  ++++
Sbjct:  304 IDQVILVGGSTRIPAVQETIKKELGKEPHKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSKSQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDKNGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNNADQLVFTV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_EXISA (Chaperone protein dnaK OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 141/212 (66.51%), Postives = 171/212 (80.66%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            +D+ +LVGG TR+P VQ+ + +   K P KGVNPDE VALGAAIQGG+L  DVK+++LLDVTPLSLGIET+GG+ T+LI+RNTTIPT KSQVFSTAADNQ  V I VLQGER MA DNK+LG F+L  IPPAPRG+PQIEV FDIDANGIV VSAKD  T KEQ ITI+SS G+ E EIE+MVKEAE +A+ DN+RK   ++RN+ D  +++
Sbjct:  303 LDKIILVGGSTRIPAVQKAIHDFTKKEPFKGVNPDEVVALGAAIQGGVLAGDVKDVVLLDVTPLSLGIETMGGVMTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAPDNKTLGRFQLTDIPPAPRGVPQIEVKFDIDANGIVHVSAKDLGTNKEQSITIQSSSGIDEAEIERMVKEAEANAEADNKRKEEAELRNETDQLVFA 514          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPE (Chaperone protein dnaK OS=Clostridium perfringens GN=dnaK PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 142/211 (67.30%), Postives = 169/211 (80.09%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D+ +LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L  DVK++LLLDVTPL+LGIETLGG+ T LI RNTTIP +KSQ+FSTAADNQT V I V+QGER+MA+DNK+LG F L GI PAPRG+PQIEV FDIDANGIV VSA DKATGKE  ITI +S  LS+ EI+K VKEAE  A+ D +RK  I+++N A+ T+Y
Sbjct:  306 IDKVILVGGSTRIPAVQEAVKNFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPARKSQIFSTAADNQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGIPQIEVAFDIDANGIVKVSATDKATGKEANITITASTNLSDAEIDKAVKEAEQFAEEDKKRKEAIEVKNNAEQTVY 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_CLOP1 (Chaperone protein dnaK OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.511e-75
Identity = 142/211 (67.30%), Postives = 169/211 (80.09%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D+ +LVGG TR+P VQE V    GK PSKGVNPDE VA+GAAIQ G+L  DVK++LLLDVTPL+LGIETLGG+ T LI RNTTIP +KSQ+FSTAADNQT V I V+QGER+MA+DNK+LG F L GI PAPRG+PQIEV FDIDANGIV VSA DKATGKE  ITI +S  LS+ EI+K VKEAE  A+ D +RK  I+++N A+ T+Y
Sbjct:  306 IDKVILVGGSTRIPAVQEAVKNFTGKEPSKGVNPDECVAMGAAIQAGVLTGDVKDVLLLDVTPLTLGIETLGGVATPLIERNTTIPARKSQIFSTAADNQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGIPQIEVAFDIDANGIVKVSATDKATGKEANITITASTNLSDAEIDKAVKEAEQFAEEDKKRKEAIEVKNNAEQTVY 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_SALTO (Chaperone protein dnaK OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=dnaK PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.675e-75
Identity = 129/207 (62.32%), Postives = 167/207 (80.68%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            V+  +LVGG TR+P V E+V ++ G+ P+KGVNPDE VA+GAA+Q G+L+ +VK++LLLDVTPLSLGIET GGIFT+LI RNTTIPTK+S+VF+TA DNQ  V I+V QGERE+A+ NK LG FEL G+PPAPRGMPQIEVTFDIDANGIV V AKD  TGKEQ++T+ +   L +++IE+M ++AE HA+ D +R+   + RN A+
Sbjct:  306 VEHVILVGGSTRMPAVTELVKQLTGRDPNKGVNPDEVVAVGAALQAGVLKGEVKDVLLLDVTPLSLGIETKGGIFTKLIERNTTIPTKRSEVFTTADDNQPSVLIQVFQGEREIAAYNKKLGTFELTGLPPAPRGMPQIEVTFDIDANGIVNVHAKDTGTGKEQKMTVTAGSSLPKEDIERMRRDAEEHAEEDKQRREEAETRNVAE 512          

HSP 2 Score: 38.891 bits (89), Expect = 1.675e-75
Identity = 19/54 (35.19%), Postives = 34/54 (62.96%), Query Frame = 2
Query:  605 SETRRIPPSTAF--EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKS 760
            +ETR +  +  +  EK L E  +K+P+E   +I +A+ +LR A+G  +++ IKS
Sbjct:  505 AETRNVAEALQWQTEKFLAESGDKLPTESRDQINEALGELRSALGGQDIEKIKS 558          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_VEREI (Chaperone protein dnaK OS=Verminephrobacter eiseniae (strain EF01-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.974e-75
Identity = 140/217 (64.52%), Postives = 176/217 (81.11%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            + + +LVGGMTR+PKVQE+V E FGK P K VNPDEAVA+GAAIQG +L  + K++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK +Q FSTA DNQ  V IKV QGEREMAS NK LGEF L GIPPA RG+PQIEV+FDIDANGI+ V AKDK TGKE +ITI+++ GLSE+EI++M+K+AEL+A  D  +  L+ +RNQA+  ++S+ + L
Sbjct:  335 IHDVILVGGMTRMPKVQEMVKEFFGKDPRKDVNPDEAVAVGAAIQGQVLTGERKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTADDNQPAVTIKVFQGEREMASGNKLLGEFNLEGIPPAARGVPQIEVSFDIDANGILHVGAKDKGTGKENKITIKANSGLSEEEIQQMIKDAELNAADDKRKLELVQVRNQAEAAVHSVTKNL 551          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RALPJ1.511e-7566.51Chaperone protein dnaK OS=Ralstonia pickettii (str... [more]
DNAK_LISMO1.511e-7564.32Chaperone protein dnaK OS=Listeria monocytogenes G... [more]
DNAK_LISMF1.511e-7564.32Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISMC1.511e-7564.32Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISIN1.511e-7564.32Chaperone protein dnaK OS=Listeria innocua GN=dnaK... [more]
DNAK_EXISA1.511e-7566.51Chaperone protein dnaK OS=Exiguobacterium sp. (str... [more]
DNAK_CLOPE1.511e-7567.30Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_CLOP11.511e-7567.30Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_SALTO1.675e-7562.32Chaperone protein dnaK OS=Salinispora tropica (str... [more]
DNAK_VEREI1.974e-7564.52Chaperone protein dnaK OS=Verminephrobacter eiseni... [more]

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Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
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