DC900131

Overview
NameDC900131
Unique NameDC900131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1096
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12640 contig Csv1_Contig12640:546..1640. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIG (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittGG) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.974e-75
Identity = 139/207 (67.15%), Postives = 173/207 (83.57%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            + + +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EI++MV++AE +A  D + + ++  RNQAD
Sbjct:  333 IHDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDILLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIQQMVRDAEANADADRKFEEVVQARNQAD 539          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_DIAST (Chaperone protein dnaK OS=Diaphorobacter sp. (strain TPSY) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.974e-75
Identity = 142/217 (65.44%), Postives = 174/217 (80.18%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +++ +LVGGMTR+PKVQE V E FGK P K VNPDEAVA+GAAIQG +L  D K++LLLDVTPLSLGIETLGG+ T++I +NTTIPTK +Q FSTA DNQ  V IKV QGERE+AS NK LGEF L GIPPA RG PQIEVTFDIDANGI+ V AKDK TGKE +ITI+++ GLSEDEI+KMVK+AEL+A  D ++  L+  RNQ +  ++++ + L
Sbjct:  335 INDVILVGGMTRMPKVQEKVKEFFGKEPRKDVNPDEAVAVGAAIQGQVLSGDRKDVLLLDVTPLSLGIETLGGVMTKMITKNTTIPTKFAQTFSTAEDNQPAVTIKVFQGEREIASANKLLGEFNLEGIPPASRGTPQIEVTFDIDANGILHVGAKDKGTGKENKITIKANSGLSEDEIQKMVKDAELNAADDKKKLELVQARNQGEAAVHTVNKSL 551          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_DEHE1 (Chaperone protein dnaK OS=Dehalococcoides ethenogenes (strain 195) GN=dnaK PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.974e-75
Identity = 141/212 (66.51%), Postives = 172/212 (81.13%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYS 636
            ++E +LVGG TR+P VQ+ V E FGK P+KGVNPDE VA+GAAIQ G+L+ +V ++LLLDV PL+LGIETLGG+ T LI RNTTIPT KSQVFSTAADNQ  V I VLQGER MA+DN++LG F L GI PAPRG+PQIEVTFDIDANGI++V AKDK TG+EQ+ITI +S GLS++E+EKM +EAE HA  D++RK  I+ RN AD   Y+
Sbjct:  334 INEVILVGGQTRMPLVQQKVKEFFGKEPNKGVNPDEVVAIGAAIQAGVLKGEVSDVLLLDVIPLTLGIETLGGVSTALITRNTTIPTSKSQVFSTAADNQPSVEIHVLQGERPMAADNRTLGRFMLDGILPAPRGVPQIEVTFDIDANGILSVKAKDKGTGREQKITITASSGLSKEEVEKMTREAEAHAAEDSKRKEEIEARNVADNLAYN 545          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 2.578e-75
Identity = 139/211 (65.88%), Postives = 173/211 (81.99%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +D+ +LVGG +R+P VQE + +  GK P KG+NPDE VA+GAAIQ G+L  +VK ++L DVTPLSLGIETLGGI T LI RNTTIPT KS+ F+TAADNQT V + VLQGER++AS NK+LG F L GI PAPRG+PQIEV FDIDANGIV VSAKDKATG EQ+ITI +S GLS++EIE+M+K+AELHA+ D +R+  ++IRNQAD+ +Y
Sbjct:  305 IDKVILVGGSSRIPAVQEAIRKYLGKEPFKGINPDEVVAMGAAIQAGVLGGEVKGIVLADVTPLSLGIETLGGICTVLIPRNTTIPTSKSETFTTAADNQTSVEVHVLQGERKLASQNKTLGRFHLSGIAPAPRGIPQIEVKFDIDANGIVHVSAKDKATGNEQKITITASTGLSKEEIERMIKDAELHAEEDRKRQEEVEIRNQADSMVY 515          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIN (Chaperone protein dnaK OS=Haemophilus influenzae GN=dnaK PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 2.578e-75
Identity = 139/207 (67.15%), Postives = 173/207 (83.57%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            + + +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EI++MV++AE +A  D + + ++  RNQAD
Sbjct:  333 IHDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIQQMVRDAEANADADRKFEEVVQARNQAD 539          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HAEIE (Chaperone protein dnaK OS=Haemophilus influenzae (strain PittEE) GN=dnaK PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 2.578e-75
Identity = 139/207 (67.15%), Postives = 173/207 (83.57%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            + + +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EI++MV++AE +A  D + + ++  RNQAD
Sbjct:  333 IHDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIQQMVRDAEANADADRKFEEVVQARNQAD 539          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_HAEI8 (Chaperone protein dnaK OS=Haemophilus influenzae (strain 86-028NP) GN=dnaK PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 2.578e-75
Identity = 139/207 (67.15%), Postives = 173/207 (83.57%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQAD 621
            + + +LVGG TR+P VQ+ V+E FGK   K VNPDEAVA+GAA+QGG+L+ DVK++LLLDVTPLSLGIET+GG+ T LI +NTTIPTKKSQVFSTA DNQ+ V I VLQGER+ A+DNKSLG+F L GI PAPRGMPQIEVTFDIDANG++ VSAKDK TGKEQQI I++S GLS++EI++MV++AE +A  D + + ++  RNQAD
Sbjct:  333 IHDIILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAIGAAVQGGVLKGDVKDVLLLDVTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLEGINPAPRGMPQIEVTFDIDANGVINVSAKDKNTGKEQQIRIQASSGLSDEEIQQMVRDAEANADADRKFEEVVQARNQAD 539          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_BACSH (Chaperone protein dnaK OS=Bacillus sphaericus GN=dnaK PE=2 SV=3)

HSP 1 Score: 282.722 bits (722), Expect = 2.578e-75
Identity = 139/213 (65.26%), Postives = 170/213 (79.81%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI 639
            +D+ +LVGG TR+P VQE V +   K P +GVNPDE VA+GAA+QGG+L  DVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTIPT KSQVFSTAADNQ  V I VLQGER MA+DNK+LG F+L  IPPAPRG+PQIEVTFDID NGIV+V AKD  T KEQ I I+S  GLSE EIE+MVK+AE +   D +RK   D+RN+AD  ++ +
Sbjct:  304 IDQVILVGGSTRIPAVQEAVRKETNKEPHRGVNPDEVVAMGAAVQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERSMAADNKTLGRFQLADIPPAPRGVPQIEVTFDIDKNGIVSVKAKDLGTNKEQTIVIQSDSGLSEAEIERMVKDAEANRDADAKRKEEADLRNEADQLVFQV 516          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.848e-75
Identity = 134/217 (61.75%), Postives = 170/217 (78.34%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSI*EEL 651
            +DE +LVGG TR+P VQ++V  + G+ P++ VNPDE VA+GAAIQ G+L  +V  +LLLDVTPLSLG+ETLGG+ T++I RNTTIPTKKS+VFSTA D QT V I VLQGERE A+DNKSLG F L GIPPAPRG+PQIEV FDIDANGI+ V+AKDK TGKEQ I+I  +  L + +I++MV+EAE +A  D ER+  I+ +NQAD+  Y   ++L
Sbjct:  328 IDEVVLVGGSTRIPAVQQLVKNLLGREPNQTVNPDEVVAVGAAIQAGVLGGEVTGILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREFANDNKSLGTFRLDGIPPAPRGVPQIEVVFDIDANGILNVTAKDKGTGKEQSISITGASTLDKTDIDRMVREAEQNASSDKERREKIERKNQADSLAYQAEKQL 544          

HSP 2 Score: 33.113 bits (74), Expect = 2.848e-75
Identity = 16/56 (28.57%), Postives = 30/56 (53.57%), Query Frame = 2
Query:  641 EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 808
            EK L E  +K+P     ++E  V DLR+A+  ++ + IK       +A+  +G ++
Sbjct:  541 EKQLQELGDKVPEADKTKVEGLVKDLREAVAKEDDEQIKKLTPELQQALFAVGSNI 596          
BLAST of DC900131 vs. ExPASy Swiss-Prot
Match: DNAK_KINRD (Chaperone protein dnaK OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=dnaK PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.849e-75
Identity = 131/212 (61.79%), Postives = 165/212 (77.83%), Query Frame = 1
Query:    1 VDEXLLVGGMTRVPKVQEVVSEIFG-KSPSKGVNPDEAVALGAAIQGGILRXDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIY 633
            +   +LVGG TR+P V  VV E+ G K P+KGVNPDE VA+GAA+Q G+L+ + K++LL+DVTPLSLGIET GGI T+LI RNT IPTK+S+VF+TA DNQ  V I+V QGERE+A DNK LG FEL GI PAPRG+PQ+EVTFDIDANGIV V+AKD+ TGKEQ +TI     LS+++IE+MVK+AE HA  D +R+   + RNQA+  +Y
Sbjct:  311 IHHVVLVGGSTRMPAVTGVVKELLGGKEPNKGVNPDEVVAIGAALQAGVLKGERKDVLLIDVTPLSLGIETKGGIMTKLIERNTAIPTKRSEVFTTADDNQPSVLIQVFQGERELARDNKPLGTFELTGIAPAPRGVPQVEVTFDIDANGIVHVNAKDRGTGKEQSMTISGGSALSKEDIERMVKDAEQHANEDKQRREEAEARNQAEGLVY 522          

HSP 2 Score: 40.4318 bits (93), Expect = 2.849e-75
Identity = 19/56 (33.93%), Postives = 34/56 (60.71%), Query Frame = 2
Query:  641 EKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 808
            EK + +  +K+P +   E++ AVA+L+ A+   +  +IK+K DA  +A  K+G  M
Sbjct:  525 EKFVADNSDKLPEDGKAEVQAAVAELKTALAGTDAAEIKAKSDAVAQASQKLGAAM 580          
The following BLAST results are available for this feature:
BLAST of DC900131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_HAEIG1.974e-7567.15Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_DIAST1.974e-7565.44Chaperone protein dnaK OS=Diaphorobacter sp. (stra... [more]
DNAK_DEHE11.974e-7566.51Chaperone protein dnaK OS=Dehalococcoides ethenoge... [more]
DNAK_HELMI2.578e-7565.88Chaperone protein dnaK OS=Heliobacterium modestica... [more]
DNAK_HAEIN2.578e-7567.15Chaperone protein dnaK OS=Haemophilus influenzae G... [more]
DNAK_HAEIE2.578e-7567.15Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_HAEI82.578e-7567.15Chaperone protein dnaK OS=Haemophilus influenzae (... [more]
DNAK_BACSH2.578e-7565.26Chaperone protein dnaK OS=Bacillus sphaericus GN=d... [more]
DNAK2_ANASP2.848e-7561.75Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]
DNAK_KINRD2.849e-7561.79Chaperone protein dnaK OS=Kineococcus radiotoleran... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900131 VSS Citrus sinensis cDNA clone VS27V48 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900131 ID=DC900131; Name=DC900131; organism=Citrus sinensis; type=EST; length=1096bp
GTGGATGAGCNGCTTTTGGTTGGAGGAATGACCCGTGTGCCAAAGGTGCA
GGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGAGTAAATC
CTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGT
GNNGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGG
TATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAA
CTATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAG
ACTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGA
CAACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTA
GAGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATT
GTCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTAC
CATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTA
AGGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATT
GATATCAGAAACCAGGCGGATACCACCATCTACAGCATTTGAGAAGAGCT
TGGGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAG
GATGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGA
TATCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGAC
AACACATGGCTGGTGGTTCTGGTGGTGGTGCTGGTTCTGGAGGTTCCCAG
GGTGGTGAACAGACTCCCGAGGCTGAGTATGAGGAGGTGAAAAAGTGAGC
ACAGAGGTAGTAAATTTCGTTCGTTGATGCTTCAAAAGGAGTCGGACATT
CANGAATGAGTCTTGTTTTGATTTGTAGTTTTAGGATATATGGCGGTTTT
GTATCTAAATTTTTATTTATTCAAGTTGTTAGGATAACGTTTTACTTTAT
TTTGAGAAACTGCACGAGCAAGTTAAAACCCTTTCCGGTGTATGGT
back to top