DC900127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FBXL2_MOUSE (F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20 Identity = 64/227 (28.19%), Postives = 109/227 (48.02%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 E L+L C ITD ++++ C KL L + SC S+ N L+ + C NL+ +++ C + +GI +L+ + + D +L I ++ + L L +++ G V+ G +L++L ++ C +TD L A+G CP L+ +C+ L+D G A+ LE + LEEC IT ++C K +ALSL C I D+ + Sbjct: 107 EHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDG--VVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHC-PKLQALSLSHCELITDEGI 330 HSP 2 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 53/223 (23.77%), Postives = 99/223 (44.39%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRL-NITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFS---LESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSC 657 E L+L C IT + + + C L L + C+ + +E L+ + C L S++++ C + D G+ + + L+ + L N+TD SL +G + L H+++ GF ++ +L+ + + C+ +TD L + CP L+ L C ++D G++ + + L L+L+ C +T L NC + L L C Sbjct: 159 EYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCSRITDDGVVQICRGC-HRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLA--RNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTCGHERLRVLELDNCLLVTDAS-LEHLENC-RGLERLELYDC 376
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: YKK7_CAEEL (Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis elegans GN=C02F5.7 PE=4 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19 Identity = 70/229 (30.57%), Postives = 115/229 (50.22%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLN--ITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 E L L +C +TD + + + C KL L +E+CSSI + ++ +G CPNL ++I C + D+G+ +LS+ SL+ + L+ +V +V H G A+ L L +++ V +G L+ L +++C ++D L ++G+ NLK L C L DNG I A+ LE L +E+C I+ SL N + LSL C I D+++ Sbjct: 152 EHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCK-SLDTLILRGCEGLTENVFGSVEAHMG-AIKKLNLLQCFQLTD--ITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISD-HTINSLANNCTALRELSLSHCELITDESI 375
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FBXL2_BOVIN (F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18 Identity = 64/227 (28.19%), Postives = 106/227 (46.70%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 E L+L C ITD ++++ C KL L + SC SI N L+ + C +L+ +++ C + G+ +L+ + + D +L I +Y + L L V++ G V+ G +L++L ++ C +TD L A+ CP L+ +C+ L+D G A+ LE + LEEC IT ++C K +ALSL C I D + Sbjct: 107 EHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDG--VVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIHC-PKLQALSLSHCELITDDGI 330 HSP 2 Score: 87.0409 bits (214), Expect = 9.958e-17 Identity = 65/230 (28.26%), Postives = 102/230 (44.35%), Query Frame = 1 Query: 4 KLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQ---RLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGF-WVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 KL L C + D +L T A+NC + L + C+ I + ++ RFC LK + + C + + + + S LE + L ++ V V G G+ L L G + + + H +L SL + SC VTD G+ + +GCP L+ CL C L+D L + A L+ L+ C +T GF NC + K + L C+ I D+ L Sbjct: 82 KLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGI-SEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRA--LLLRGCTQLEDEALKHIQNYCH---ELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEK-MDLEECILITDRTL 304 HSP 3 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 51/208 (24.52%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRL------NITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSG-HGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFS---LESLQLEECHRITQL 594 E L+L C IT + + + C L L + C+ + +E L+ + +C L S++++ C V D G+ L +LQ L ++TD SL + + L H+++ GF ++ H L+K+ + C+ +TD L + CP L+ L C ++D+G++ + + L L+L+ C IT + Sbjct: 159 EYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCP------RLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHDLEKMD---LEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSNSPCGHERLRVLELDNCLLITDV 357
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FBL3_ARATH (F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 61/227 (26.87%), Postives = 105/227 (46.26%), Query Frame = 1 Query: 4 KLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQR-LNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 KLD+ C ++ ++ IA +CP L+ L +ESCS + E +G+ C L+ + + D + D+G+ S+ S+ SL +KL LNITD L+ IG G L+ L + +G+TD+G+ + +GC +L+ + C ++D L+S +K + L++ + C IT G + C ++ + L C I D L Sbjct: 359 KLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNE-IDDEGLKSI--SSCLSLSSLKLGICLNITDKGLSYIGM----------------------------GCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSL-LQTFESRGCPNITSQGLAAIAVRC-KRLAKVDLKKCPSINDAGL 552 HSP 2 Score: 87.0409 bits (214), Expect = 9.958e-17 Identity = 59/224 (26.34%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNIT------DVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGS----------------GHGLQK------LKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRIT 588 ++LDL C ++ + K L + ++ CS + +GL+A+G C +LK +S+ C V D+G++SL+ ++ L++L+IT VS+ I + + L + VS FW++G GL+ L SL + C+ +TD GL +G GC NL++ L + ++D G+ + A+ LE++ + C IT Sbjct: 281 QRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCS-VTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLV------MKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDIT 497 HSP 3 Score: 70.8626 bits (172), Expect = 7.385e-12 Identity = 62/220 (28.18%), Postives = 101/220 (45.91%), Query Frame = 1 Query: 7 LDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNC----GEKXKALSLVS 654 LDL P IT + L I K L +L +E C + ++ L+++ C +LK + C+ + +G+ SLLS A Y LQRL+++ H ++ F + L VS L+S+ + C VT GL+A+G C +LK+ L KC ++D GL S L L + C +++++ +C K ++ SLVS Sbjct: 207 LDLSYLP-ITGKCLHDILK-LQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGY------LQRLDLS--------HCSSVISLDFASSLKKVSA--------------LQSIRLDGC-SVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVS 395
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: GRRA_EMENI (SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella nidulans GN=grrA PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15 Identity = 53/228 (23.25%), Postives = 102/228 (44.74%), Query Frame = 1 Query: 1 EKLDLCQCPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLN-ITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 + LD+ + ++TD L +A+NC +L L I C + ++ L AV + C LK + + V D+ I S + LE + LQ +T+ S+ + + +L L + + F + + L+ L +T+C + D +E + P L+ L KC F++D + + K +L + L C I + +C + + + L C + D+++ Sbjct: 191 QALDVSELRSLTDHTLFKVAENCNRLQGLNITGCVKVTDDSLIAVSQNCRLLKRLKLNGVSQVTDKAILSFAQNCPSILE-IDLQECKLVTNQSVTALMTTLQNLRELRLAHCTEIDDSAFLDLPRHIQMTSLRILDLTACENIRDEAVERIVSSAPRLRNLVLAKCKFITDRAVWAICKLGKNLHYVHLGHCSNINDSAVIQLVKSC-NRIRYIDLACCSRLTDRSV 416
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL16_RAT (F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13 Identity = 63/218 (28.90%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 31 ITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVI-GHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 ITD L + + ++ L + C+ GL + + S+S+ DC V D IA++ S +L ++ LQ ++TD +LA G + L L ++ G V+ H L L SL+++ C VTD G+E V + L+ L C ++D L A LE L L+ C RIT G S L+ ++L L C ++D L Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWS--SLSARITSLSVSDCINVADDAIAAI-SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG--VVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGL--SYLSTMSSLRSLYLRWCCQVQDFGL 415
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL16_MOUSE (F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13 Identity = 63/218 (28.90%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 31 ITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVI-GHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 ITD L + + ++ L + C+ GL + + S+S+ DC V D IA++ S +L ++ LQ ++TD +LA G + L L ++ G V+ H L L SL+++ C VTD G+E V + L+ L C ++D L A LE L L+ C RIT G S L+ ++L L C ++D L Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWS--SLSARITSLSVSDCINVADDAIAAI-SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG--VVNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGL--SYLSTMSSLRSLYLRWCCQVQDFGL 415
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FXL16_HUMAN (F-box/LRR-repeat protein 16 OS=Homo sapiens GN=FBXL16 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 62/218 (28.44%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 31 ITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVI-GHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXKALSLVSCLGIKDQNL 681 ITD L + + ++ L + C+ GL + + S+S+ DC V D IA++ S +L ++ LQ ++TD +LA G + L L ++ G V+ H L L +L+++ C VTD G+E V + L+ L C ++D L A LE L L+ C RIT G S L+ ++L L C ++D L Sbjct: 205 ITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWS--SLSARITSLSVSDCINVADDAIAAI-SQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG--VVNVVHSLPNLTALSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGL--SYLSTMSSLRSLYLRWCCQVQDFGL 415
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FBL12_ARATH (F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 64/224 (28.57%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 22 CPAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRL-NITDVSLA----VIGHY-----------------GMAVTDLFLTGLP-HVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCG 624 C I+D + TIA CP L +++ C+ I + GL+ + R +LK +++ C LV D GI +L S A LE VK+ +IT V + +G+ G + L ++G+ ++ + G +GSG KL+ L + C V D +EA+ KGCP L+++ L C + +G + K +L+ L + C + G L CG Sbjct: 127 CFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDFGIKAL-SQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIA-SKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLA--LRCG 345
BLAST of DC900127 vs. ExPASy Swiss-Prot
Match: FBL5_ARATH (F-box/LRR-repeat protein 5 OS=Arabidopsis thaliana GN=FBL5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 54/204 (26.47%), Postives = 86/204 (42.16%), Query Frame = 1 Query: 25 PAITDRALITIAKNCPKLIDLTIESCSSIGNEGLQAVGRFCPNLKSISIKDCRLVGDQGIASLLSSATYSLEKVKLQRLNITDVSLAVIGHYGMAVTDLFLTGLPHVSERGFWVMGSGHGLQKLKSLTITSCMGVTDLGLEAVGKGCPNLKQFCLRKCAFLSDNGLISFAKAAFSLESLQLEECHRITQLGFFGSLLNCGEKXK 636 P + D A+ IA +C +L DL + S I + L ++ R C NL +++ C D +A L KL+ LN+ AV + A+ G +L+SL + C ++D G+ ++ GCP+L+ L C ++D +++ A L SL L C IT + SL G K K Sbjct: 102 PQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCR------KLKILNLCGCVEAVSDNTLQAI---------------------GENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMY-SLAQSGVKNK 277 The following BLAST results are available for this feature:
BLAST of DC900127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900127 ID=DC900127; Name=DC900127; organism=Citrus sinensis; type=EST; length=688bpback to top |