DC900118

Overview
NameDC900118
Unique NameDC900118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:56..1106. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 3.304e-24
Identity = 79/226 (34.96%), Postives = 114/226 (50.44%), Query Frame = 3
Query:  231 SAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPIT---TGNVYAINDALSAEGAAEDYETCLKHLTKSNI--LATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDA 890
            S+K  KEK  F + LSGGSLI+ L + +     D + W  W +++ DER+VP   ++SNY  A    L  +      T  VY I+++L      +D + C  +  K  I   A   +   P FDL LLG  PDGHIASLFP     L+E   WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +   +      +    A    +WF+D DA
Sbjct:   79 SSKPKKEK-RFKIALSGGSLIEVLHEGLLKR--DDVRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESL-----IDDPQECADNYEKVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPSSIVNEGAAGRVSWFVDDDA 296          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.063e-22
Identity = 72/246 (29.27%), Postives = 118/246 (47.97%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATS 896
            + V   E++L + L +Y  +       + G+ ++ +SGGS+     K +     + + W +  +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+  V+     +Q       Q     ++ T FLD+DA +
Sbjct:   17 LNVSGDEKELILQLRRYLEEKLTYLLDQNGTVSIGVSGGSMPRVFSKAILSLPQEQLNWKRIRIFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICDRDQKYP--AAQARPFNDKLTLFLDEDAAT 251          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.039e-22
Identity = 85/263 (32.32%), Postives = 132/263 (50.19%), Query Frame = 3
Query:  168 VQVFDSEEDLAVSLAKYTADL--SAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYV-DSIEWAKWHVFWVDERVVPKDHDDSNY----KLAYDGFLSQV-PITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM-ALAEEEFTWFLDKDATSKL*ES 911
            +Q F  ++ L     K+  +   SA  G     F + +SGGS+  +L   LV    +   I+W +W +F+ DER+VP +   SNY    K   D  + Q   +  G  VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K + +   L   +NS+L  V +  +   + TWFLD +A + + E+
Sbjct:    4 LQRFSEKKSLIHEFGKFILEKQESALTGDADAVFNIAISGGSMNQALYESLVNDKNIFPHIKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPLVHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMHDVL-IVKNSELPSVLVNEMVGTKVTWFLDDEAGALIPEN 254          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.039e-22
Identity = 72/217 (33.18%), Postives = 105/217 (48.39%), Query Frame = 3
Query:  237 KFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFTWFLDK 884
            K  +EK    VVL+GG   +    KL E  +     W + H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +N+S Y+  ++ G  K + +   L +      LP      +E+  WF+ K
Sbjct:   27 KLLEEKDKIFVVLAGGRTPLPVYEKLAEQKF----PWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTP----LPAYFVRGKEKTVWFVGK 220          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.035e-18
Identity = 72/217 (33.18%), Postives = 103/217 (47.47%), Query Frame = 3
Query:  195 LAVSLAKYTADLSAKFGKEKGSFTVVLSGG-SLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDL 830
            LA +LA   A+        KG   VVLSGG S +  L KL   P    ++WAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK + ++ AL  N  +++
Sbjct:   28 LAATLAHDVAERLRAAIAAKGQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGKLATLRAALAGNDLTEM 226          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.293e-17
Identity = 69/236 (29.24%), Postives = 109/236 (46.19%), Query Frame = 3
Query:  189 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEE-EFTWFLDKDA 890
            E+L   LA      + +  +  G F + LSGGS   +L ++L    Y     WA  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+IN +  +A++V G  K                 P+   L    +  W++D DA
Sbjct:  561 EELISKLANDIEATAVRAVRRFGQFHLALSGGSSPVALFQQLATAHY--GFPWAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTLVSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.995e-17
Identity = 67/236 (28.39%), Postives = 112/236 (47.46%), Query Frame = 3
Query:  189 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MALAEEEFTWFLDKDA 890
            E+L   LA      + +  +  G F + LSGGS  I   ++L    Y  S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+IN +  +A++V G  K                 P+  +     +  W++D +A
Sbjct:  559 EELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHY--SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_RHIME (6-phosphogluconolactonase OS=Rhizobium meliloti GN=pgl PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.100e-14
Identity = 65/233 (27.90%), Postives = 108/233 (46.35%), Query Frame = 3
Query:  165 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVT----FIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMAL 851
            N+ +F++   LA +LA       A     +G+ ++ +SGGS   +  + +    +D   W+K  V  VDER VP ++D SN++L  D  L         V     A +AE AA            +     +A+ G P  D+++LGMG DGH AS FPG   L+E     T       ++      R+TFTF  +  + Y+ + + G+GK   +  A  +   ++ +P++  L
Sbjct:    4 NMHIFENPSALAEALADDVGARLAAAIAARGTASLAVSGGSTPKAFFRSLSRRELD---WSKVTVTLVDERFVPPENDRSNHRLVADNLLKDGAAEARFVPLYQAAETAEAAA------------AIASGRTASLGAP-LDVVVLGMGTDGHTASFFPGGTRLEEALDPTTPRGVITMEAEGAGEPRLTFTFSSLQDAGYLVLHIEGSGKKEVLAQAEASGDEAE-MPIRAML 219          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_AGGAC (6-phosphogluconolactonase OS=Aggregatibacter actinomycetemcomitans GN=pgl PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 4.048e-14
Identity = 60/214 (28.04%), Postives = 92/214 (42.99%), Query Frame = 3
Query:  267 VVLSGGSLIDSLRK-LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMALAEEEFT-WFLDKDATSKL 902
            + LSGGS    L K L + PY + I W   H +W D+R+V     +SNY          + I   N++ I          + ++  L  +    +           FD ++LGMG DGH +SLFP H    ++E  +  I   P+    RI+ T  +I  +  I  +V G GK+  ++        +   P     A+   T W+LDKDA   L
Sbjct:   32 ISLSGGSTPKLLFKTLAQSPYAEQINWRNLHFWWGDDRMVSPSDPESNYGEVQKLLFDHIQIPAENIHRIRGENEPHFELKRFQAELSAVISDGV-----------FDWIILGMGADGHTSSLFP-HQTNFDDEN-LAVIAKHPESGQIRISKTAKLIEQAKRITYLVTGEGKAEILKEIQSTPAENLPYPAAKIYAKNGVTEWYLDKDAAKLL 232          
BLAST of DC900118 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.009e-13
Identity = 49/172 (28.49%), Postives = 78/172 (45.35%), Query Frame = 3
Query:  267 VVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 782
            + LSGGS    + +     +   ++W +   FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +IN++  I +VV G  K
Sbjct:   32 LALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
The following BLAST results are available for this feature:
BLAST of DC900118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
SOL2_YEAST3.304e-2434.966-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
6PGL_CAEEL1.063e-2229.27Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
SOL4_YEAST4.039e-2232.326-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
6PGL_THEMA4.039e-2233.186-phosphogluconolactonase OS=Thermotoga maritima G... [more]
6PGL_PSEPU6.035e-1833.186-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
G6PE_HUMAN2.293e-1729.24GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
G6PE_MOUSE2.995e-1728.39GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
6PGL_RHIME3.100e-1427.906-phosphogluconolactonase OS=Rhizobium meliloti GN... [more]
6PGL_AGGAC4.048e-1428.046-phosphogluconolactonase OS=Aggregatibacter actin... [more]
6PGL_TREPA2.009e-1328.496-phosphogluconolactonase OS=Treponema pallidum GN... [more]

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Properties
Property NameValue
Genbank descriptionDC900118 VSS Citrus sinensis cDNA clone VS27V33 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900118 ID=DC900118; Name=DC900118; organism=Citrus sinensis; type=EST; length=1051bp
CTCGTGCCGCATTCGGCACGAGTCAGTTTCAGTTTCAGTTACTCAGAAGA
CCAAACTCACTCCTCCAATTTCGAAACATTTCCCTTGATCGGAACAAATC
ATCGGACTGCGTGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATA
ANANCAAGAACAAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCT
GTGTCTTTGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGA
GAAGGGCTCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCC
TCAGGAAATTAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAA
TGGCATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGA
TAGCAATTATAAGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTA
CCACTGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCA
GCTGAAGATTACGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATT
AGCTACATCTGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGG
GTATGGGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTT
CTCAAGGAGAATGAGAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCC
ACCTCCAGAGAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCAT
ATATTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACT
GCATTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCATT
GGCTGAAGAAGAATTCACTTGGTTTCTTGACAAAGACGCNACTTCAAAGC
TGTAAGAGTCAGAACAATTTGCTGTATGCATGAATCCCTGTTATCTGCTA
TGATAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTTT
GTTAGTAATGAGAACAGAGTGAACTTGTTAATGGAAGTGAAAAAGATTTA
A
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