DC900117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900117 vs. ExPASy Swiss-Prot
Match: RL3_NANEQ (50S ribosomal protein L3P OS=Nanoarchaeum equitans GN=rpl3p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11 Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = 3 Query: 3 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 389 R K+ +G+RKV IG+ P R+ TV GQ GYH RTE NK I K+G + + GG+ YG V +L+KG GP+KR++ LR+++ + +E I ++I S K Sbjct: 211 RRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIG-----------------EPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGI--EYISLSPK 320
BLAST of DC900117 vs. ExPASy Swiss-Prot
Match: RL3_CALMQ (50S ribosomal protein L3P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11 Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 6 LPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 314 LPR K +G R+ +G PA V +T R GQ G+H RTE NK+I K+ E ITP GGF HYG+V Y+LI+G G KR++ R Sbjct: 228 LPRWHKHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE--------------ITPKGGFKHYGIVRSGYMLIEGSTPGVVKRLIAFR 316 The following BLAST results are available for this feature:
BLAST of DC900117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900117 ID=DC900117; Name=DC900117; organism=Citrus sinensis; type=EST; length=641bpback to top |