DC900116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_NITWN (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=pckA PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.478e-78 Identity = 148/273 (54.21%), Postives = 180/273 (65.93%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 877 D R LIGDDEH W +G+ N EGGCYAKCI LSRE EP+I+ A K FGAVLENVV DE TR D++D S TENTR+AYP+E+IPNA + PKN+++LA DAFGVLPP+++L AQ MYHF+SGYTA VAGTE + EP FSACFG+ F+ HP Y ML + KH WLVNTGW+GG YG G R+ + TR ++ A GSL + FG +PT V GV ILDP TWADK + T L G+F++NF F N Sbjct: 248 DPGRTLIGDDEHGWSKDGIFNFEGGCYAKCIRLSREAEPEIYAASKRFGAVLENVVHDEVTRVPDFNDGSKTENTRSAYPLEFIPNASLTGCAGQPKNLVMLAADAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTERDLGNEPQPEFSACFGSPFLPRHPGVYGNMLRALIAKHNVDCWLVNTGWTGGKYGTGRRMPIKVTRALLGAALDGSLRGVPFHDDRYFGFAVPTSVPGVEPHILDPIRTWADKIEFDRTARALIGMFRQNFTKFEN 520
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_METEP (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium extorquens (strain PA1) GN=pckA PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.478e-78 Identity = 136/273 (49.82%), Postives = 183/273 (67.03%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 880 D +R LIGDDEH W +G+ N EGGCYAK I LSR EP+I+ +FG V+ENVV D TR D+ D S+TENTR AYP+++I NA HPKN+++L CDAFGV+PP++KL A+ MYHF+SGYTA VAGTE G+ P ATFS CFGA F+ HP+ Y +L E M +HG WLVNTGW+GG G G R+ + TR+++ A GSL +++ FG +P EV GV +++L P TW +K A+ +T +L +F+ NF+ F ++ Sbjct: 250 DSSRQLIGDDEHGWSRDGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVVIDPLTRVPDFDDASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETWTNKAAFADTATRLVTMFRENFKRFESH 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_METC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pckA PE=3 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.478e-78 Identity = 136/273 (49.82%), Postives = 183/273 (67.03%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 880 D +R LIGDDEH W +G+ N EGGCYAK I LSR EP+I+ +FG V+ENVV D TR D+ D S+TENTR AYP+++I NA HPKN+++L CDAFGV+PP++KL A+ MYHF+SGYTA VAGTE G+ P ATFS CFGA F+ HP+ Y +L E M +HG WLVNTGW+GG G G R+ + TR+++ A GSL +++ FG +P EV GV +++L P TW +K A+ +T +L +F+ NF+ F ++ Sbjct: 250 DSSRQLIGDDEHGWSRDGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVVIDPLTRVPDFDDASLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETWTNKAAFADTATRLVTMFRENFKRFESH 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_NITHX (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=pckA PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 3.293e-78 Identity = 144/271 (53.14%), Postives = 179/271 (66.05%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 871 D R LIGDDEH W G+ N EGGCYAKCI LS+E EP+I+ A K FGAVLENVV DE TR D+ D S TENTR+AYP+E+IPNA + PKN+++LA DAFGVLPP+++L AQ MYHF+SGYTA VAGTE G+ EP FS CFG+ F+ P+ Y ML E + +H WLVNTGW+GG YG G R+ + TR ++ A GSL ++ FG +PT V G+ ILDP TWADK + +T L G+F+ NF F Sbjct: 248 DPKRTLIGDDEHGWSKEGIFNFEGGCYAKCIKLSQEAEPEIYAASKRFGAVLENVVHDESTRVPDFDDGSKTENTRSAYPLEFIPNASLTGRAGQPKNLVMLAADAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPRDPSVYGNMLRELIARHNVDCWLVNTGWTGGKYGTGRRMPIKVTRALLGAALDGSLREVQFRTDRYFGFAVPTSVPGIEPHILDPIKTWADKAEFDKTACALVGMFQNNFTRF 518
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 5.617e-78 Identity = 144/276 (52.17%), Postives = 182/276 (65.94%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 889 D R LIGDDEH W +NG+ N EGGCYAK I LS E EP+I+ +FG VLENVV +E +RE D++D S+TENTR AYP+++IPNA HPK +I+L DAFGV+PP+++L Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+ HP +Y +L E + +HG WLVNTGW+GG+YG G R+ + TR ++ A SG L ++ FG +P V GV ILDP +TWADK AY KL +F NF F N+ G Sbjct: 248 DPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNE-SREPDFNDGSLTENTRCAYPMDFIPNASKTGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLVNTGWTGGAYGTGKRMPIKATRALLAAALSGELGQVEFRADTNFGFAVPVSVHGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFENHVDG 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_METNO (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=pckA PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 1.251e-77 Identity = 141/270 (52.22%), Postives = 179/270 (66.30%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 871 D R L+GDDEH W G+ N EGGCYAK I LSRE EP+I+ +FG V+ENVV D TR D+ D S TENTR AYP+ +IPNA HPKN+++L CDAFGVLPP++KL A+ MYHF+SGYTA VAGTE G+K P ATFS CFGA F+ HP+ Y +L + + +H WLVNTGW+GG G G R+ + TR+++ A GSL A++++ FG +PT V GV IL P TW DK A+ ET KL +F+ NF+ F Sbjct: 248 DPARALLGDDEHGWSPKGIFNFEGGCYAKTIRLSREAEPEIYATTERFGTVMENVVIDPVTRLPDFDDASRTENTRCAYPLPFIPNASPTGRAGHPKNIVMLTCDAFGVLPPIAKLTGAEAMYHFLSGYTAKVAGTEKGLKGPEATFSTCFGAPFMPRHPSVYGNLLRDLIARHHVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLTAALDGSLAKADFRRDPYFGFAVPTSVPGVEPHILYPVKTWQDKAAFAETAKKLVEMFQANFKRF 517
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_RHISN (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium sp. (strain NGR234) GN=pckA PE=3 SV=2) HSP 1 Score: 289.656 bits (740), Expect = 2.134e-77 Identity = 142/276 (51.45%), Postives = 183/276 (66.30%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 889 D NR LIGDDEH W D GV N EGGCYAK I LS EP+I+ + FG V+ENVV DE R D+ + S+TENTR AYP+++IPNA P P+ +I+L DAFGVLPP++KL Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+ HP++Y +L + + ++G T WLVNTGW+GG+YG GSR+ + TR ++ A GSL +A ++ FG +P V GV ILDP +TW+D QAY +L +F NF F ++ G Sbjct: 248 DPNRTLIGDDEHGWSDKGVFNFEGGCYAKAIRLSEAAEPEIFATTRRFGTVMENVVLDER-RAPDFDNGSLTENTRIAYPLDFIPNASETGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAYGTGSRMPIKVTRALLSAALDGSLNSAAFRTDANFGFAVPVSVPGVDDRILDPRSTWSDGQAYDAQARRLVDMFIANFAKFESHVDG 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_METPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=pckA PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 2.134e-77 Identity = 134/273 (49.08%), Postives = 182/273 (66.67%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 880 D +R LIGDDEH W +G+ N EGGCYAK I LSR EP+I+ +FG V+ENVV D TR D+ D ++TENTR AYP+++I NA HPKN+++L CDAFGV+PP+++L A+ MYHF+SGYTA VAGTE G+ P ATFS CFGA F+ HP+ Y +L M +HG WLVNTGW+GG G G R+ + TR+++ A GSL +++ FG +P EV GV +++L P TW +K A+ ET +L +F+ NF+ F ++ Sbjct: 250 DSSRKLIGDDEHGWSRDGIFNFEGGCYAKTIRLSRNAEPEIYATTERFGTVMENVVIDPLTRVPDFDDATLTENTRCAYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIARLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRALMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQTEFRRDPYFGFSVPVEVAGVETQVLSPVETWTNKAAFAETATRLVTMFRENFKRFESH 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_RHIEC (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pckA PE=3 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 3.641e-77 Identity = 143/276 (51.81%), Postives = 180/276 (65.22%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAI-KFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 889 D R LIGDDEH W +NG+ N EGGCYAK I LS E EP+I+ +FG VLENVV +E RE D+ D S+TENTR AYP+ +IPNA HPK +I+L DAFGV+PP+++L Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+ HP +Y +L E + +HG WLVNTGW+GG+YG G R+ + TR ++ A SG L ++ FG +P V+GV ILDP +TWADK AY KL +F NF F ++ G Sbjct: 248 DPARTLIGDDEHGWSENGIFNFEGGCYAKTIRLSAEAEPEIYATTQRFGTVLENVVLNER-REPDFDDGSLTENTRCAYPMHFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRGLLAAALSGKLGQLQFRTDTNFGFAVPVSVDGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFEDHVDG 522
BLAST of DC900116 vs. ExPASy Swiss-Prot
Match: PCKA_RHIME (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium meliloti GN=pckA PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 6.210e-77 Identity = 142/276 (51.45%), Postives = 182/276 (65.94%), Query Frame = 2 Query: 65 DHNRYLIGDDEHCWGDNGVSNIEGGCYAKCIDLSREKEPDIWNAIK-FGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 889 D NR LIGDDEH W + GV N EGGCYAK I LS EP+I+ + FG V+ENVV DE R D+ D S+TENTR AYP+ +IPNA P P+ +I+L DAFGVLPP++KL Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+ HP++Y +L + + ++G T WLVNTGW+GG++G GSR+ + TR ++ A GSL NA+++ FG +P V GV + ILDP +TWAD AY +L +F NF F + G Sbjct: 248 DPNRTLIGDDEHGWSEKGVFNFEGGCYAKAIRLSEAAEPEIFATTRRFGTVMENVVLDER-RLPDFDDGSLTENTRCAYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGSRMPIKVTRALLSAALDGSLNNASFRTDANFGFAVPVSVPGVEAGILDPRSTWADGVAYDTQARRLVDMFIANFAKFERHVDG 522 The following BLAST results are available for this feature:
BLAST of DC900116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900116 ID=DC900116; Name=DC900116; organism=Citrus sinensis; type=EST; length=1107bpback to top |