DC900113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.876e-31 Identity = 89/225 (39.56%), Postives = 127/225 (56.44%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 860 +A ++EF+ATLLF++ V + + K + A GL+ +A A +FV V A ISGGH+NPAVT GL + +++I Y +AQCLG+I L+ F+ N + VA+G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + WI+WVGP V GALA Y Sbjct: 19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVFVT---NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.451e-31 Identity = 84/232 (36.21%), Postives = 126/232 (54.31%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIG-HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 887 RA I+EF+AT +F++ + +++ K D GL+ ++ A + V V ISGGH+NPA+TFG L ++SLIRA+ Y +AQ LGA+ L++ + +ASG A+ E TF L+Y ++ DPKR HV +APL +GF + LA P G G+NPAR FG A++ W HW++W+GPFVGA A ++Y++ +A Sbjct: 27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRL----TTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFVGAGLAGLLYEYLVIPSA 247
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.459e-31 Identity = 80/236 (33.90%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 168 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 875 M E + +SF+RA+ AEF T+ +++ + + A G +L IA AFG ++ +V +SG HINPAVTF + ++SL RA+ Y+ AQ LGA+ G ++ NT+ G + G A EI T V +F+ D +R+ R V L IGF++ + HL + TG +NPARSF AV+ N + +HW++WVGP +G + +IL Sbjct: 1 MWEFRSFSFWRAVFAEFFGTMFYVFFGLGASLKW-----AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.459e-31 Identity = 81/236 (34.32%), Postives = 126/236 (53.39%), Query Frame = 3 Query: 168 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 875 M EL+ SF+RA+ AEF ATL +++ + + A G + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA+ G ++ + NT+ +G + A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G + + ++L Sbjct: 1 MWELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----APGPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.130e-31 Identity = 80/236 (33.90%), Postives = 126/236 (53.39%), Query Frame = 3 Query: 168 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 875 M EL+ SF+RA+ AEF ATL +++ + + + A G + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA+ G ++ + NT+ + G A EI T V +F+ D +R+ + V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP +G + + ++L Sbjct: 1 MWELRSASFWRAIFAEFFATLFYVFFGLGSSLRW-----APGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.312e-31 Identity = 89/225 (39.56%), Postives = 126/225 (56.00%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 860 +A +AEF+ATLLF++ V + I G A GL+ IA A +FV V A ISGGH+NPAVTFGL + ++++ + Y +AQ LGA L+K F+ H G +G ++ + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV N + +W++WVGP + G LA Y Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHG----VAGISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 9.312e-31 Identity = 85/232 (36.64%), Postives = 126/232 (54.31%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKG----SALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 RA +AEF++TL+F++ + I K +D A GL+ A A +FV V A ISGGH+NPAVTFG+ L ++L+R + Y +AQ LG++ L+ + GG A G + G +AL EI+ TF LVYTV+ +A DPK + + +AP+ IGF V LA +G +NPA +FG AV+ W +HW++W GP +G A + ++ Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL--------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.216e-30 Identity = 91/226 (40.27%), Postives = 127/226 (56.19%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVI--GHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVA-SGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAY 860 +A +AEF+ATLLF++ V + I G A GL+ IA A +FV V A ISGGH+NPAVTFGL + ++++ V Y VAQ LGA L+ F+ H G T A +G ++ + E++ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV + + +W++WVGP V G LA Y Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVAC-LLLGFVTH-----GKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.216e-30 Identity = 84/231 (36.36%), Postives = 126/231 (54.55%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG---GANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 872 RA AEF + ++F++ + + + K + GL+ + + +FV V A +SGGH+NPAVTFG F+ ++L+RA+ Y +AQ LGA+ L+K S GG A +++ G +A+ EI+ TF LVYTV+ +A DPK+ + ++APL IG V L G +NPA SFG AV+ W +HW++WVGPF+GA AA + I Sbjct: 21 RAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKV-------STGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237
BLAST of DC900113 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.709e-30 Identity = 83/227 (36.56%), Postives = 122/227 (53.74%), Query Frame = 3 Query: 198 RALIAEFVATLLFLYVSVATVIGHKK--QSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQY 869 RA +AEF +T +F++ + + K Q A LL +A A +F V + +SGGH+NPAV+FG + ++S+IRAV Y +AQ LG+I +++ N++ V+ G G E++ TF L+YTV+ +A DPKR A V +APL IG V L P G +NPA +FG +++ W HWIFWVGP +GA AA ++Y Sbjct: 21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVT----NNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEY 236 The following BLAST results are available for this feature:
BLAST of DC900113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900113 ID=DC900113; Name=DC900113; organism=Citrus sinensis; type=EST; length=960bpback to top |