DC900109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS1_MOUSE (Fatty acid desaturase 1 OS=Mus musculus GN=Fads1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 56/233 (24.03%), Postives = 109/233 (46.78%), Query Frame = 3 Query: 6 PQHFPIFQSAALMEAEKKYITAEELRTHNKAE-DLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVSE---ISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWK---WTHNGPPHCLQQ 653 P P A+ + +Y T EE+ + E + W+ I KVY++++++++HPGG + + AGQD TD F+A+H G +Y++ L G + FE ++ ++ ++R L + G+ + ++ L VA + ++G S+ + +LL + Q+ ++ HD GH V + +N + L G +WW + H+ P+C ++ Sbjct: 3 PDPVPTPGPASAQLRQTRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFVAFHINKGLVRKYMNSLLIGELAPEQPSFEPTKNKALTDEFRELRATVERMGLMKANHLFFLVYLLHILLLDVAAWLTLWIFGT----SLVPFILCAVLLSTVQAQAGWLQHDFGHLSVFGTSTWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRK 231
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_RAT (Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 60/212 (28.30%), Postives = 95/212 (44.81%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEV---------------SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 EE++ HN D W+ I KVY+VT+W+++HPGG + + +G+D TDAF A+H LD F G F++ + S+I++D+R L +F K H L F +++ ++ ES+ W ++ G+G +L Q+ ++ HD GH V +N I L G S WW H Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHYSGEDATDAFRAFH-------LDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDMNLF-KTNH----------LFFFLLLSHIIVMESIAWFILSYFGNGWIPTVITAFVLATSQAQAGWLQHDYGHLSVYKKSIWNHIVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS1_RAT (Fatty acid desaturase 1 OS=Rattus norvegicus GN=Fads1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 53/218 (24.31%), Postives = 105/218 (48.17%), Query Frame = 3 Query: 51 EKKYITAEELRTHNKAE-DLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVSE---ISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWK---WTHNGPPHCLQQ 653 + +Y T EE+ + E + W+ I KVY++++++++HPGG + + AGQD TD F+A+H G +Y++ L G + FE ++ ++ ++R L + G+ + ++ L VA + ++G S+ +LL + Q+ ++ HD GH V ++ +N + L G +WW + H+ P+C ++ Sbjct: 18 QMRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFVAFHINKGLVRKYMNSLLIGELAPEQPSFEPTKNKALTDEFRELRATVERMGLMKANHLFFLFYLLHILLLDVAAWLTLWIFGT----SLVPFTLCAVLLSTVQAQAGWLQHDFGHLSVFSTSTWNHLVHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRK 231
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS2_MOUSE (Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14 Identity = 58/212 (27.36%), Postives = 94/212 (44.34%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEV---------------SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCES----VWAHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 EE++ HN D W+ I KVY+VT+W+++HPGG + + +G+D TDAF A+H LD F G F++ + S+I++D+R L +F K H L F +++ ++ ES + ++ G+G +L Q+ ++ HD GH V +N + L G S WW H Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHYSGEDATDAFRAFH-------LDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDMNLF-KTNH----------LFFFLLLSHIIVMESLAWFILSYFGTGWIPTLVTAFVLATSQAQAGWLQHDYGHLSVYKKSIWNHVVHKFVIGHLKGASANWWNHRH 217
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS3_MOUSE (Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 49/194 (25.26%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 E++R H+ D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H + ++L L G + + +++ +D+R L +FE + L + M ++ + W + + + ++L Q + HD GH + T ++N +AQ L G S WW + H Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLHFVRKFLKPLLIGELAPEEPSQDGAQNAQLIEDFRALRQAAEDMKLFEADTTFFALLLGHILAMELLAWLIIYLLGPGWVSSILAALILAISQAQCWCLQHDLGHASIFTKSRWNHVAQQFVMGQLKGFSAHWWNFRH 223
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS3_HUMAN (Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 51/194 (26.29%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDFEV-SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLG-SGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 E++R H++ D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H + ++L L G QD + +++ +D+R L+ +F+ + L + M V+ + W + +L QS + HD GH + +N +AQ L G S WW + H Sbjct: 26 EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRH 219
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FADS3_RAT (Fatty acid desaturase 3 OS=Rattus norvegicus GN=Fads3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 49/194 (25.26%), Postives = 90/194 (46.39%), Query Frame = 3 Query: 72 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 E++R H+ D W+ I+ +VYD++ WA++HPGG + + + +D TDAF A+H + ++L L G + + +++ +D+R L +FE + L + M ++ V W + + + ++L Q + HD GH + ++N +AQ L G S WW + H Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHSAEDATDAFHAFHQDLHFVRKFLKPLLIGELAPEEPSQDGAQNAQLIEDFRALRQAAEDMKLFEADTTFFALLLGHILAMELLAWLLVYLLGPGWVSSVLAALILAISQAQCWCLQHDLGHASIFPKSRWNHVAQQFVMGQLKGFSAHWWNFRH 223
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 57 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEISKDYRRLYIE 335 K T +E+ HN+ DLWI + GKVY++T+W HPGG+ LL AG+D T+ F +YHP T DK ++ ++ +E+ IS Y+E Sbjct: 13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESYHPMT-----DKHYS--LIKQYEIGYISSYEHPKYVE 98
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 3 Query: 42 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTGYFVQDFEVSEISKDYRRLYI 332 M +++K ++ EE+ HNK +D W+ I GKVYDVT + HPGGD LL+ G+D T+ F H TA +DK F G E+ S R Y+ Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIG------EIDSSSVPATRTYV 92
BLAST of DC900109 vs. ExPASy Swiss-Prot
Match: FAD2L_HUMAN (Fatty acid desaturase 2-like protein OS=Homo sapiens PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 57/200 (28.50%), Postives = 86/200 (43.00%), Query Frame = 3 Query: 75 ELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHP--GTAWQYLDKLFTGYFV------QDFEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLGSG----MLLGFL----WIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH 626 E++ HN D + I KVY+V+ WA +HPGG L + AG+D D F A HP YL L G + + S++ KD++ L+ MF L L FV ++ + + H GSG M + FL S+++ HD+GH + K+N + L G+S W + H Sbjct: 63 EIQRHNHEADQLV-INCKVYNVSSWADRHPGGHQVLNHCAGEDAMDVFRAMHPELDIVQLYLKPLLIGELAPGEPSQERHKNSQLVKDFQELWSIAEAMNMFHAN-------LGFFFLHFVQILILEVLAWLIVYHFGSGWPVTMFISFLLTISQASSSFLQHDAGHLSIFRKSKWNHVVHKFVMCHLKGLSADRWNYWH 254 The following BLAST results are available for this feature:
BLAST of DC900109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900109 ID=DC900109; Name=DC900109; organism=Citrus sinensis; type=EST; length=695bpback to top |