DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.343e-60
Identity = 121/244 (49.59%), Postives = 165/244 (67.62%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL---HPI---KH---IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQA-RYRSTCRLXS 744
            FL+K+IAE + TY LVF  C S  ++  +++ V+  G ++  GL + V+IY++GHISGAH+NPAVT+AFA+   FP KQVP Y  +Q+ G+  A+ TLR+L    H +   KH   IG+ SP GSDLQA  ME +VTF +MF+ S VATD +AIGELAG+A+GS V +  ++A PVS  SMNP R++GPA+    YKGIW+YLV P  G   GAW YN +R TDKP   I+++  +  T R+ S
Sbjct:   53 FLQKLIAEFLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGS-SPVGSDLQAFTMEFIVTFYLMFIISGVATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFLKTVRIGS 295          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.771e-59
Identity = 114/224 (50.89%), Postives = 152/224 (67.86%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQA 714
            +K+IAE+I TY +VF  CG   ++      ++  G  V  GLIV VMIY+ GHISGAH NPAVT+ FA  R FPW QVP+Y  AQ  G++ ASLTLR++    P    GTT P+ S  +AL+ EI+++F +MFV S VATD +A+GELAGIAVG  + +   +AGP+SG SMNPAR++GPA+    YK IWVY+VGP  G   G + YN+IR TDKP   ++++
Sbjct:   43 QKLIAEMIGTYFIVFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTT-PADSPARALVAEIIISFLLMFVISGVATDNRAVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVYNLIRFTDKPLRELTKS 265          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.679e-58
Identity = 116/225 (51.56%), Postives = 156/225 (69.33%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQA 714
            L+K+IAE I TY ++F  CGS A++      V+  G  V  GLIV VM+Y VG+ISGAH NPAVT+ F+    FPWKQVP+Y  AQL G++ AS TL +L    P  + GT  P GS+ Q+L +EI+++F +MFV S VATD +AIG++AGIAVG  + +   +AGP+SG SMNPAR++GPAI    Y G+WVY+VGP  GT  GA+ YN+IR TDKP   ++++
Sbjct:   42 LQKLIAEAIGTYFVIFAGCGSVAVNKI-YGSVTFPGICVTWGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTV-PVGSNGQSLAIEIIISFLLMFVISGVATDDRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVVGPIIGTLAGAFVYNLIRSTDKPLRELAKS 264          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.885e-58
Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVL-LHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKP 693
            FL+K++AE + TY L+F  C S  ++    + ++  G ++  GL++TV++Y VGHISG H NPAVT+AFA+ R FP  QVP Y  AQL G++ AS TLR+L +        T P+G++LQA + E ++TF +MFV   VATD +A+GE AGIA+GS + +  ++ GPV+G SMNPAR++GPA     Y+GIW+YL+ P  G   GAW YN++R TDKP
Sbjct:   36 FLQKLVAEAVGTYFLIFAGCASLVVNENYYNMITFPGIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRAVGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYEGIWIYLLAPVVGAIAGAWVYNIVRYTDKP 253          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.052e-56
Identity = 111/226 (49.12%), Postives = 151/226 (66.81%), Query Frame = 1
Query:   55 VIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI------KHI--GTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAIS 708
            ++AEI+ TY ++F  CG+  ++      V+  G     GL+V V++Y V HISGAH NPAVT+AFA    F WKQVP Y  AQ+ G+  ASLTLRV+          +H+  GTT P+GS  QA  +E V++F +MFV S VATD +AIGELAG+AVG+ V +  + AGPV+G SMNPAR++GPA+ +  Y G+WVY+  P +GT  GAW+YN++R TDKP   I+
Sbjct:   66 ILAEILGTYFMIFAGCGAVVVNQSTGGAVTFPGICAVWGLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFGTT-PAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWAYNLLRFTDKPLRDIA 290          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.124e-53
Identity = 96/210 (45.71%), Postives = 145/210 (69.05%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIR 678
            RK+ AE + T +L+F    +A ++   +   + +G + + GL V ++I + GHISGAH+NPAVT+AFAA++HFPWK VP+Y  AQ+  +VSA+  L+ +  P    G T P+    QA  +E +++F++MFV +AVATDT+A+GELAGIAVG+ V +  ++AGP +  SMNP RT+GPAIA++ Y+ IWVYL  P  G  +GA +Y +++
Sbjct:   80 RKLGAEFVGTLILIFAGTATAIVNQKTDGAETLIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVK 289          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.774e-53
Identity = 99/213 (46.48%), Postives = 143/213 (67.14%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETD 687
            RK+ AE + T++L+F       ++   +   + +G +   GL V ++I + GHISGAH+NP++T+AFAA+RHFPW  VP Y AAQ++ ++ AS  L+ + HP    G T PS S  QA  +E ++TF ++FV +AVATDT+A+GELAGIAVG+ V +  ++AGP +GGSMNP RT+GPA+AS  Y+ +WVYLV P  G   GA  Y  ++  D
Sbjct:   78 RKLGAEFVGTFILIFTATAGPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKLND 290          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.774e-53
Identity = 98/216 (45.37%), Postives = 144/216 (66.67%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTT--SPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            RK+ AE + T++L+F    +  ++      +S  G +   GL VT +I + GHISGAH+NP++T+AFAA+RHFPW QVP Y A Q+ G++ A   L+ + HP    G T   P+ S  QA   E ++TF+++FV +AVATDT+A+GELAGIAVG+AV +  ++AGP +GGSMNP RT+GPA+A+  Y+ +W+YL+ P  G   GA  Y  ++  D+
Sbjct:   83 RKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLRDE 298          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.054e-52
Identity = 101/216 (46.76%), Postives = 145/216 (67.13%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH--IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRET 684
            FL+ ++AE +AT+ L+F   G+  +    +  V+  G +VA G  V  M+YAVGH+SGAH+NPAVTL FA    FPW++ P YA AQ   A +AS+ LR++    +H  +  T P G+  Q+L++E V+TF +MFV  AVATD +A+G +AG+AVG  + +  + AGPVSG SMNPAR++GPA+  S Y  +WVY++GP  G   GAW+Y++IR T
Sbjct:   55 FLQMLLAEFLATFFLMFAGLGAITVEE-KKGAVTFPGVAVAWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLRLMFGG-RHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATDDQAVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTALWVYILGPFAGAAAGAWAYSLIRLT 268          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 8.923e-52
Identity = 96/224 (42.86%), Postives = 147/224 (65.62%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGT--------TSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            F++K+I E + T+ ++F  C +  ++      V+  G ++  GL+VTVMIY++GH+SGAH NPAV++AFA+ + FP+ QVP Y AAQL G+  A+  LR++ H    + +        T PS S+  + +ME + TF++MFV SAVATD +A G  AGIA+G+ + +  + +GP+SG SMNPAR++GPA+    YK +W+Y+V P  G   GAW+Y ++R T K
Sbjct:   41 FVQKLIGEFVGTFTMIFAGCSAIVVNETYGKPVTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIGALSGAWTYGLLRSTKK 264          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
NIP11_ARATH2.343e-6049.59Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
NIP41_ARATH5.771e-5950.89Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP1_NICAL1.679e-5851.56Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NO26_SOYBN4.885e-5848.17Nodulin-26 OS=Glycine max PE=1 SV=2[more]
NIP12_ORYSJ2.052e-5649.12Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
NIP61_ARATH2.124e-5345.71Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
NIP51_ARATH2.774e-5346.48Probable aquaporin NIP5-1 OS=Arabidopsis thaliana ... [more]
NIP31_ORYSJ2.774e-5345.37Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]
NIP14_ORYSJ1.054e-5246.76Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
NIP31_ARATH8.923e-5242.86Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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