DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V +E +AT L VF   GSA    + +   S L  ++A GL +  ++ A+GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  +  P
Sbjct:    4 FSRAVFSEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAILHEITPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_CANFA (Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V AE +AT L VF   GSA    + +   S L  ++A GL +  ++ A+GH+SGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  +  P
Sbjct:    4 FSRAVFAEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALLHEITPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V++E +AT L VF   GSA    + +   S L  ++A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  L  P
Sbjct:    4 FSRAVLSEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALLHELTPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_AMBHO (Aquaporin-2 (Fragment) OS=Amblysomus hottentotus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V +E +AT L VF   GSA    + +   S L  ++A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  L  P
Sbjct:    4 FSRAVFSEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYVAAQLLGAVAGAALLHELTPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_ELEMA (Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V +E +AT L VF   GSA    + +   S L  ++A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  L  P
Sbjct:    4 FSRAVFSEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAALLHELTPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPI 357
            F R V AE +AT L VF   GSA    +     S L  ++A GL +  ++ A+GH+SGAH+NPAVT+A     H  + +   Y AAQL GAV+ +     LLH I
Sbjct:    4 FSRAVFAEFLATLLFVFFGLGSAL--NWPSALPSTLQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGA----ALLHEI 102          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_ERIEU (Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F R V  E +AT L VF   GSA    + +   S L  ++A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  +  P
Sbjct:    4 FSRAVFTEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQMLGHISGAHINPAVTVACLVGCHISFLRAAFYVAAQLLGAVAGAALLHEVTPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP 354
            F + V +E +AT L VF   GSA    + +   S L  ++A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  L  P
Sbjct:    4 FSKAVFSEFLATLLFVFFGLGSAL--NWPQALPSGLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALLHELTPP 105          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_MACPR (Aquaporin-2 (Fragment) OS=Macroscelides proboscideus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVL 345
            F R V +E +AT L VF   GSA          + L  S+A GL +  ++  +GHISGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  L
Sbjct:    4 FSRAVFSEFLATLLFVFFGLGSALNWPSTVPIPTVLQISMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYVAAQLLGAVAGAALLHKL 104          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQP2_DUGDU1.540e-1140.38Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]
AQP2_CANFA1.540e-1140.38Aquaporin-2 (Fragment) OS=Canis familiaris GN=AQP2... [more]
AQP2_PROHA2.011e-1140.38Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_AMBHO2.011e-1140.38Aquaporin-2 (Fragment) OS=Amblysomus hottentotus G... [more]
AQP2_ELEMA2.627e-1140.38Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 ... [more]
AQP2_RABIT3.430e-1141.90Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
AQP2_ERIEU5.851e-1139.42Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=A... [more]
AQP2_ORYAF7.642e-1139.42Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2... [more]
AQP2_MACPR7.642e-1140.59Aquaporin-2 (Fragment) OS=Macroscelides proboscide... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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