DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.765e-29
Identity = 85/211 (40.28%), Postives = 118/211 (55.92%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            ++  +AE IAT L VF   GSA   AY +  ++  GA    GL+   + +A+          +ISG H+NPAVT   A   H        Y  AQL GA  A L L+ + H  K I T   +G S+L+ ++MEIV+TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+A+  + G WVY VGP  G
Sbjct:   18 VKAYVAEFIATLLFVFAGVGSAI--AYGQ--LTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHG-KAIPTHGVAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIG 223          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.223e-29
Identity = 80/223 (35.87%), Postives = 123/223 (55.16%), Query Frame = 1
Query:   52 KVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL-----------HPIKHIGTTSPSGSDLQA-LIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYK--GIWVYLVGPXTGTFMGAWSYNMI 675
            K +AE+I T+ L F  CGSA ++A + +  +  +G S+A GL V  M YA+GHISG H+NPAVTL  AA   FP KQ+  Y  AQ+ GA++A+  L ++                  G  SP   +L A  +ME+V+T   +FV    +T  KA    A +A+G A+ +  +++ PV+  S+NPAR+ GPA+    +    +W++ V P  G  +G   Y ++
Sbjct:    5 KYLAEMIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGLAAGGRFPVKQIAPYIIAQVLGAIAAAALLYLIASGAAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMG-STHGKAPAGFAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAIGQLWLFWVAPLLGGVLGGVIYRVL 226          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 83/211 (39.34%), Postives = 117/211 (55.45%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            ++  +AE IAT L VF   GSA   AY +  ++  GA    GL+   + +A+          +ISG H+NPAVT   A   H        Y  AQL GA  A L L  + H  K I T + +G S+L+ ++ E+V+TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+A+  + G WVY VGP  G
Sbjct:   18 IKAYVAEFIATLLFVFAGVGSAI--AYGQ--LTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHG-KAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVG 223          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.365e-28
Identity = 79/236 (33.47%), Postives = 125/236 (52.97%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSA-ALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGA--WSYNMIRETDKPAH 699
            P  +R  +AE ++T++ VF   GS  AL        +  G +  GGL++  + +A+          ++SG H+NPAVT A          +   Y  AQL GA+ A L LR+  + ++ +G    SG S+L  L+MEI++TF++++V  + A D K  +IG +A +A+G  V    ++ GP  G SMNPAR  GPA+    +   W+Y VGP  G  + A  + Y +I   ++P H
Sbjct:   20 PDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMIIPSVNEPPH 255          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.088e-28
Identity = 83/210 (39.52%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAAL-------SAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            ++  +AE IAT L VF   GSA          A D      +  +VA  L + V +    + SG H+NPAVT   A   H        Y  AQL GA  A L LR + H  K I T   SG  ++L+ ++ EIV+TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+A++ + G WVY VGP  G
Sbjct:   18 IKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDP--AGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHG-KAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIG 224          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.533e-27
Identity = 79/212 (37.26%), Postives = 112/212 (52.83%), Query Frame = 1
Query:   40 GFLRKVIAEIIATYLLVFVTCGSAALSAY-----DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-----PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK-AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTG 642
            G +R V+AE+I T+L VF   GSA  +        +  V     ++A  L+V VM+ A  H+SG H+NPAVTL  AA       +  +Y AAQL G+  A L L  L       P+  +G    +   L+ ++ME V+TFS++F   A   D + A+G +  + VG  V    +  GP SG SMNPAR+ GPA+ +  +   WVY VGP  G
Sbjct:   16 GCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGA---LRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIG 224          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 77/236 (32.63%), Postives = 121/236 (51.27%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAAL--SAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYN-MIRETDKPAH 699
            P  +R  +AE ++T++ VF   GS       Y EH  +  G +  GGLI+  + +A           ++SG H+NPAVT            +   Y  AQL GA+ A L LR+  + ++ +G    SG   +  L++EI++TF +++V  +   D K  ++G +A +A+G  V    ++ GP SG SMNPAR  GPA+    +   W+Y VGP  G+ + A  Y  M+  T+ P H
Sbjct:   20 PDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEH-AAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVIPTEPPTH 254          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 77/237 (32.49%), Postives = 118/237 (49.79%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAY-----DEHRVSKLGASVAGGL------------IVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP----IKHIGTTSP-SGSDL-QALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYK-GIW----VYLVGPXTGTFMGAWSYNMI 675
            ++  AE++ T++LVF   G+A ++       D+     +G    GGL             +  +IY++G ISGAH+NPAVT+A  ++  FP ++V  Y  AQ  GA   SL     + P    +  +G T+P  G    QA++ E + TF +M V   VA D +A    AG+ +G  V       G ++G S+NPART GP +  S     +W    +Y++GP  G    AW YN +
Sbjct:    7 KRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAPPGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYL 243          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 76/239 (31.80%), Postives = 123/239 (51.46%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSD------------LQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQAR 717
            ++K  AE I T+ L F  CGSA ++A + +  +  +G S+A GL V  M YA+GHISG H+NPAVT+  AA   FP  Q+  Y  AQ+ GA+ A+  L ++         T    S+            +   + E+V+T   +F+    AT  +A    A +A+G A+ +  +++ PV+  S+NPAR+ GPA  +       +W++ V P  G  +G   Y  + E  +P   ++ A+
Sbjct:    3 MKKYAAEAIGTFWLTFAGCGSAVIAAGFPQVGIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQYSMMACFLTEVVMTMMFLFIIMG-ATHGRAPAGFAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAMAQLWLFWVAPLIGGALGGVIYRWLSE--EPTGVVAGAK 238          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 79/228 (34.65%), Postives = 125/228 (54.82%), Query Frame = 1
Query:   40 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHR-------VSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVL----LHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATD----TKAIGEL-AGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            G +R V+AE++ T+L VF T  SAA++A  + +        +    ++A  L   V++ A  H+SG H+NPAVT+      H    +  +Y AAQL  + +A + LR L    + P+  +G      S +Q L+ME+++TFS++FVT A+  D     +AIG L  G+ VG+     S+  G  +G SMNPAR+ GPA+A+  +   WVY +GP  G  +  + Y  +
Sbjct:   21 GCVRAVLAELVLTFLFVF-TGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGI---SPMQGLVMEVILTFSLLFVTYAMILDPRSQVRAIGPLLTGLIVGA----NSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESL 240          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIP21_ORYSJ4.765e-2940.28Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
AQPZ_RHOPA6.223e-2935.87Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
TIP21_MAIZE1.061e-2839.34Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP32_ARATH2.365e-2833.47Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP22_MAIZE3.088e-2839.52Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP44_MAIZE1.533e-2737.26Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP31_ARATH1.695e-2632.63Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQPM_ARCFU1.695e-2632.49Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
AQPZ_BRAJA2.213e-2631.80Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP41_MAIZE2.891e-2634.65Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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