DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 75/225 (33.33%), Postives = 119/225 (52.89%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMI 675
            LRK+ AE++ T++LVF  CGS   +A + E  +  +G S+A GL V  MIYAVGHISG H NPAVT+   A   F   +V  Y  +Q+ G + A+  L V+                   G  SP G  LQ+ I+  +V  ++  +    ATD +A    A +A+G A+ + ++++ P++  S+NPAR+   AI  + +  + +W + V P  G  +G   Y ++
Sbjct:    2 LRKLAAELLGTFVLVFGGCGSVVFAAAFPELGIGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAPPGFAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQNTWALEQLWFFWVMPIIGGIVGGGIYRLL 226          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 79/231 (34.20%), Postives = 120/231 (51.95%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSGSDL-QALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            + K +AE+  T+ LV   CGSA L+A + +  +  LG S+A GL V  M +A+GHISG H+NPAVT+   A   F  K++  Y  AQ+ G V A   L  +                   G  SP G  L  AL+ E+V+T   + V    ATD +A    A IA+G  + +  +++ PV+  S+NPAR+ G A+    +    +W++ V P  G  +GA +Y +I  ++K
Sbjct:    1 MNKYLAELFGTFWLVLGGCGSAVLAAAFPDVGIGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILG-ATDQRAPQGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYKLISGSNK 230          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 79/238 (33.19%), Postives = 117/238 (49.16%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAAL-----SAYDEHRVSKLGASVAGGL------------IVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLR----VLLHPIKHIGTTSPSG--SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG--IW----VYLVGPXTGTFMGAWSYNMI 675
            ++ IAE I T++LVF   GSAA+     S         +G  + GGL             +   IYA+G+ISG H+NPAVT+   +V+ FP ++V  Y  AQL GA   S        +    +  +G T+P    S  QA++ E+V TF +M     +A D +A    AGI +G  V       G +SG S+NPART GP +    + G  +W    +Y++GP  G  + A +Y  +
Sbjct:    6 KRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYL 243          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26
Identity = 80/224 (35.71%), Postives = 118/224 (52.68%), Query Frame = 1
Query:   25 EHYPPGFLRKVIAEIIATYLLVFVTCGSA-------ALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSY 666
            + +  G L+  +AE IAT L VF   GSA       A +A D   +  +  + A  L V V I A  +ISG H+NPAVTL  A   +        Y  AQL G+  A L L+ + + +        +G + LQ ++MEI++TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+ +  +   W+Y  GP  G  +  + Y
Sbjct:   11 DSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAA--NISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 79/231 (34.20%), Postives = 119/231 (51.52%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSGSDL-QALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            + K +AE+  T+ LV   CGSA L+A + +  +  LG S+A GL V  M +A+GHISG H+NPAVT+   A   F  K++  Y  AQ+ G V A   L  +                   G  SP G  L  AL+ EIV+    + V    ATD +A    A IA+G  + +  +++ PV+  S+NPAR+ G A+    +    +W++ V P  G  +GA +Y +I  ++K
Sbjct:    1 MNKYLAELFGTFWLVLGGCGSAVLAAAFPDVGIGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEIVMAMMFLLVILG-ATDQRAPQGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVALYVGDWATAQLWLFWVAPILGALLGAVAYKLISGSNK 230          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 80/232 (34.48%), Postives = 119/232 (51.29%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL----------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHA 702
            RK I+E + T+ LVF  CGSA  +A + E  +  LG + A GL V  M YAVG ISG H NPAV++       FP   +  Y  AQ+ GAV A+  L V+L                G  SP G S L AL++EI++T   + V          +G  A +A+G A+ +  +++ PV+  S+NPAR+ G A  +     + +W++ + P  G  +GA  + +  E +K  HA
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGRVPVG-FAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVVWKIFGEEEKAGHA 233          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.874e-25
Identity = 77/233 (33.05%), Postives = 127/233 (54.51%), Query Frame = 1
Query:   40 GFLRKVIAEIIATYLLVFVTCGSAALSAY------DEHRVSKLGA-SVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVL----LHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKA-IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYN---MIRETDKP 693
            G +R V+AE++ T+L VF T  SA+++A       +   ++ L A ++A  L   V++ A  H+SG H+NPAVT+      H    +  +Y AAQL  +  A + LR L    + P+  +G        +Q L+ME+++TFS++FVT A+  D ++ +  +  +  G  V   S+  G  +G SMNPAR+ GPA+A+  +   WVY +GP  G  +  + Y    M+ +T +P
Sbjct:   23 GCVRAVLAELVLTFLFVF-TGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGI---RPMQGLVMEVILTFSLLFVTYAMILDPRSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEP 251          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 78/229 (34.06%), Postives = 118/229 (51.53%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDE-------HRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSD-LQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHA 702
            ++  +AE IAT L VF   GSA   AY++            +  +VA    + V +    ++SG H+NPAVTL  A   +        Y  AQ  G+  A L L+ + + +        +G D +Q ++MEI++TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+AS  +   W+Y  GP  G  +  + Y  +  T   AHA
Sbjct:   18 IKAYVAEFIATLLFVFAGVGSAI--AYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFIT---AHA 241          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 79/230 (34.35%), Postives = 117/230 (50.87%), Query Frame = 1
Query:   25 EHYPPGFLRKVIAEIIATYLLVFV------TCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL-HPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGE------LAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            E + PG LR V  E++ T+L VF+      T G AA  A +   V+   A++A  L+V V+  A  H+SG H+NPAVTL+ A   H    +  +Y AAQL G+  A L LR L       +   +     +Q +  E V TF+++ V  A   D +          L G+ VG+     +V  G ++G SMNPAR+ GPA+A+  +   WVY VGP  G  +   +Y ++
Sbjct:   16 EAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVT--AAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGA----NTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELL 239          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 79/224 (35.27%), Postives = 117/224 (52.23%), Query Frame = 1
Query:   25 EHYPPGFLRKVIAEIIATYLLVFVTCGSA-------ALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSY 666
            + +  G L+  +AE IAT L VF   GSA       A +A D   +  +  + A  L V V I A  +ISG H+NPAVTL  A   +        Y  AQL G+  A L L+ + + +        +G +  Q ++MEI++TF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+ +  +   W+Y  GP  G  +  + Y
Sbjct:   11 DSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAA--NISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIY 232          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
AQPZ_PHOLL2.891e-2633.33Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQPZ_VIBVU3.775e-2634.20Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQPM_METTM4.931e-2633.19Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP1_TOBAC8.410e-2635.71Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_VIBVY1.098e-2534.20Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ1_AGRT51.098e-2534.48Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP42_MAIZE1.874e-2533.05Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP_ANTMA2.447e-2534.06Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP42_ORYSJ2.447e-2534.35Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP2_TOBAC2.447e-2535.27Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
back to top