DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 84/241 (34.85%), Postives = 122/241 (50.62%), Query Frame = 1
Query:   16 VWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL--HPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAH 699
            V  E Y P  LR  +AE I+T  L+FV  GS +  A++  +++  GA+   GL+   + +A G         +ISG H+NPAVT       +    +  +Y  AQL G+V+A   L       PI   G ++  GS L AL+ EIV+TF +++   A A D K  ++G +A IA+G  V    +  G  SG SMNPA   GPA+ S  +   WVY  GP  G  +    Y+ +   D+ AH
Sbjct:   11 VQEEVYHPNALRAALAEFIST--LIFVFAGSGSGIAFN--KITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGS-LNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFV-FIDENAH 245          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRE 681
            RK+ AE   T+ LVF  CGSA L+A + E  +   G ++A GL V  M +AVGHISG H NPAVT+   A   FP K+V  Y  AQ+ G + A+  L ++                   G  SP G S L AL++E+V++   + V    ATD  A    A IA+G A+ +  +++ PV+  S+NPAR+   AI    +  + +W + V P  G  +G   Y  + E
Sbjct:    3 RKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRE 681
            RK+ AE   T+ LVF  CGSA L+A + E  +   G ++A GL V  M +AVGHISG H NPAVT+   A   FP K+V  Y  AQ+ G + A+  L ++                   G  SP G S L AL++E+V++   + V    ATD  A    A IA+G A+ +  +++ PV+  S+NPAR+   AI    +  + +W + V P  G  +G   Y  + E
Sbjct:    3 RKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRE 681
            RK+ AE   T+ LVF  CGSA L+A + E  +   G ++A GL V  M +AVGHISG H NPAVT+   A   FP K+V  Y  AQ+ G + A+  L ++                   G  SP G S L AL++E+V++   + V    ATD  A    A IA+G A+ +  +++ PV+  S+NPAR+   AI    +  + +W + V P  G  +G   Y  + E
Sbjct:    3 RKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL------------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFY--KGIWVYLVGPXTGTFMGAWSYNMIRE 681
            RK+ AE   T+ LVF  CGSA L+A + E  +   G ++A GL V  M +AVGHISG H NPAVT+   A   FP K+V  Y  AQ+ G + A+  L ++                   G  SP G S L AL++E+V++   + V    ATD  A    A IA+G A+ +  +++ PV+  S+NPAR+   AI    +  + +W + V P  G  +G   Y  + E
Sbjct:    3 RKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHG-ATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 228          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 80/233 (34.33%), Postives = 111/233 (47.64%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGG----------LIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKH-IGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG-IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAH 699
            P F R V+ E++ T+L VF+  G+A          +    S AGG          L+V V+  A  HISG H+NPAVTL+ A   H    +  +Y AAQ+  + +A   LR L   +   +   +     LQ ++ E V TFS++FV  A   D + +   AG +  G  V   SV    +SG SMNPAR+ GPA+AS  +   WVY VGP  G  +    Y        P H
Sbjct:   15 PDFFRGVLGELVLTFLFVFIGVGAAMTDG------ATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTH 241          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 73/229 (31.88%), Postives = 118/229 (51.53%), Query Frame = 1
Query:   40 GFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKL------GASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK-AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYN---MIRETDKP 693
            G +R V+AE++ T++ VF    +   +   E   + +      G ++A  L   V++ A  H+SG H+NPAVT+A  A  H    +  +Y AAQL  +  A + LR L   +     T  SG   +Q L+MEI++TFS++FV  A   D + ++     +  G  V   ++  G  SG SMNPAR+ GPA+A+  +   W+Y +GP  G  +    Y    +++ T +P
Sbjct:   17 GCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEP 245          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 77/228 (33.77%), Postives = 114/228 (50.00%), Query Frame = 1
Query:   19 WNEHYPPGFLRKVIAEIIATYLLVFVTCGSAAL-------SAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            +++ +    L+  +AE I+T + VF   GSA         +  D   +  +      GL V V I A  +ISG H+NPAVT   A            Y  AQL GA+  ++ ++            S  G+  + ++MEI+VTF +++   A A D K  ++G +A IA+G  V    ++AGP SGGSMNPAR+ GPA+AS  Y  IW+Y VGP  G  +    Y  +
Sbjct:   10 FDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGA--NISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA-FEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 71/219 (32.42%), Postives = 113/219 (51.60%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIK--HIGTTS--PSGSDLQALIMEIVVTFSMMFVTSAVATDTKA-IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDK 690
            R ++ E++ T+ L+FV  GS    +  +        +   GL V  +   +GH+SG H+NPAVTL F  V      +   Y   Q  GA++ +  ++V L  +    +G +S  PS +  QA+++E ++TF ++FV  AV+   +  I   A +AVG A+    + A  +SG SMNPAR+ GPA+    +   WVY VGP  G  +    Y +I +  K
Sbjct:   24 RMLLGELVGTFFLIFVGVGSTTSGSVPQ-------IAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWVGPIAGGLLAGIIYRLIFKVRK 235          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 80/220 (36.36%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYA---------VGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGS--DLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSY 666
            L+  ++E IAT L VF   GSA   A    +++  GA    GL+   + +A           +ISG H+NPAVTL  A   +        Y  AQ  G++ A L L V +   K + T   S     ++ ++MEIVVTF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+ S     IW+Y VGP  G  +    Y
Sbjct:   18 LKAYLSEFIATLLFVFAGVGSAVAFA----KLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLL-VFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIY 232          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIP12_ARATH2.447e-2534.85Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQPZ_SHIFL2.447e-2535.68Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI2.447e-2535.68Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL62.447e-2535.68Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO572.447e-2535.68Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP43_MAIZE3.196e-2534.33Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP41_ORYSJ3.196e-2531.88Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP22_ORYSJ4.174e-2533.77Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
AQP_DROME4.174e-2532.42Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
TIP23_ARATH5.451e-2536.36Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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