DC900105

Overview
NameDC900105
Unique NameDC900105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 80/218 (36.70%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAAL-------SAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH--PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSY 666
            L+  ++E IAT L VF   GSA         +A D   +  +  + A  L V V I A  +ISG H+NPAVTL  A   +        Y  AQ  G++ A L L  + +   +   G  +  G+ ++ ++MEIVVTF++++   A A D K  ++G +A IA+G  V    + AGP SGGSMNPAR+ GPA+ S  +  IW+Y VGP  G  +    Y
Sbjct:   18 LKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAA--NISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGA-IEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIY 232          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 73/219 (33.33%), Postives = 111/219 (50.68%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLH-----------PIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSY 666
            +++ AE+I T+ LV   CGSA L+A     +  LG + A GL V  M +A+GHISG H+NPAV+        FP K++  Y  AQ+ GA+ A+  + ++                     SP G  L A  +  VV  +M  V    ATD +A    A IA+G A+ +  +++ PV+  S+NPAR+ GPA  +     + +W++ V P  G  +G   Y
Sbjct:    5 KRMGAELIGTFWLVLGGCGSAVLAASSPLGIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 76/220 (34.55%), Postives = 115/220 (52.27%), Query Frame = 1
Query:   61 AEIIATYLLVFVTCGSAALSA-YDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL-----------HPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPA--IASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            AE + T+ LV   CGSA L+A +    +   G ++A GL V  M YA+GHISG H+NPAV++   A   FP  Q+  Y  AQ+ GA++A   L V+                     SP G S L AL+ E+V+T   + V    ATD +A    A +A+G A+ +  +++ PV+  S+NPAR+ G A  +     + +W++ + P  G  +GA  Y +I
Sbjct:    6 AEFLGTFWLVLGGCGSAVLAAGFPNLGIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMG-ATDKRAPAGFAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25
Identity = 78/238 (32.77%), Postives = 114/238 (47.90%), Query Frame = 1
Query:   49 RKVIAEIIATYLLVFVTCGSAAL-----SAYDEHRVSKLGASVAGGL------------IVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTL----RVLLHPIKHIGTTS--PSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKG--IW----VYLVGPXTGTFMGAWSYNMI 675
            ++ IAE I T+ LVF   G+AA+     S         +G  + GGL             +   IYA+G+ISG H+NPAVT+   +V+ FP + V  Y  AQL GA  AS        +    I  +G T+  P     QA++ E V TF +M     +A D +A    AGI +G  V       G ++G S+NPART GP +    + G  +W    +Y++GP  G  + A +Y  +
Sbjct:    6 KRCIAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAALTYQYL 243          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.214e-24
Identity = 76/220 (34.55%), Postives = 112/220 (50.91%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAAL-------SAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTK--AIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            LR  +AE I+T L VF   GSA         +A D   +  +       L V V I A  +ISG H+NPAVT   A            Y  AQL G+ +A   L+ +   +     +  +G   ++ ++MEI++TF++++   A A D K  ++G +A +A+G  V    + AGP SGGSMNPAR+ GPA+A+  + G WVY VGP  G  +    Y  +
Sbjct:   18 LRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGA--NISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNV 235          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.072e-24
Identity = 78/243 (32.10%), Postives = 124/243 (51.03%), Query Frame = 1
Query:   46 LRKVIAEIIATYLLVFVTCGSAALSAY---------DEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLL-----------HPI--KHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAI---ASSFYKGIWVYLVGPXTGTFMGAWSY-NMIRETDKP 693
            ++K IAE I T+ LV   CGSA  +A+         +E  +  LG ++A GL V    YA+GHISG H NPAV+      + FP  Q+  Y  AQ+ GA+ ASL + ++            +P+     G  SP G   L AL++E V+TF  + V   V TD  A    A  A+G A+ +  +++ P++  S+NPAR+ G A+     +    +W++ + P  G  +  + Y N++ +  +P
Sbjct:    1 MKKYIAEFIGTFWLVLGGCGSAVFAAFIAAPGGGNTNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGV-TDKTAPAGFAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVLEDLGRP 242          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24
Identity = 78/235 (33.19%), Postives = 113/235 (48.09%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMG--AWSYNMIRETDKPAH 699
            P  +R  I+E IAT + VF   GS        H  S +  S AGGL+   + +A+G         ++SG H+NPAVT            +  +Y AAQL GAV+A+L LR+     +  G    SG  D  A+++E V+TF  ++   A   D K   +G +A +AVG  +    +  GP  G  MNPAR  GPA+    ++  WVY +GP  G  +    + Y +I   D   H
Sbjct:   24 PDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTI--STAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLLIPPADAVPH 256          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.615e-24
Identity = 74/220 (33.64%), Postives = 106/220 (48.18%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVA----GGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSG-SDLQALIMEIVVTFSMMFVTSAVATDTKA--IGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMI 675
            P  +R  I+E IAT + VF   GS        H +S  G  VA      L + V +    +ISG H+NPAVT            +  +Y  AQL GAV+A+L LR+    ++  G    SG  D  A+++E V+TF +M+   A   D K   +G +A +AVG  +    +  GP  G  MNPAR  GPA+    ++  WVY +GP  G  +    Y  +
Sbjct:   22 PDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYL 241          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.872e-24
Identity = 76/233 (32.62%), Postives = 125/233 (53.65%), Query Frame = 1
Query:   43 FLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHP-------IKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAG---IAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGAWSYNMIRETDKPAHAISQ 711
            F R V+AE +AT L VF   GSA    + +   S L  ++A GL +  ++ A+GH+SGAH+NPAVT+A     H  + +   Y AAQL GAV+ +  L  +  P       +  +   S +G   QA+ +E+ +T  ++    A +TD +  G+  G   +++G +V +  +L    +G SMNPAR++ PAI +  +   WV+ +GP  G  + +  YN +     PA ++S+
Sbjct:    9 FSRAVLAEFLATLLFVFFGLGSAL--NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAG---QAVTVELFLTLQLVLCIFA-STDERR-GDNVGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNYV--LFPPAKSLSE 232          
BLAST of DC900105 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23
Identity = 74/235 (31.49%), Postives = 118/235 (50.21%), Query Frame = 1
Query:   37 PGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIG-TTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIG-ELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPXTGTFMGA--WSYNMIRETDKPAHA 702
            PG  R  ++E +AT + VF   GS     Y   ++ +      GGL+V  + +A+          + SG H+NPAVT      R   + +  +Y AAQL GAV A L LR+    ++ +G T      +  AL++E+V+TF +++   A A D ++ G ++A +A+G       +  GP  G +MNPAR  GPA+    ++  WVY +GP  G  M    + + M  + + PA A
Sbjct:   25 PGATRAALSEFVATAVFVFAAEGSV----YGLWKMYR-DTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQPEPPAAA 254          
The following BLAST results are available for this feature:
BLAST of DC900105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
TIP22_ARATH5.451e-2536.70Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQPZ_PSEPK5.451e-2533.33Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ_CHRVO5.451e-2534.55Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPM_METTH9.299e-2532.77Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP21_ARATH1.214e-2434.55Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQPZ_SYNY32.072e-2432.10Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP32_MAIZE2.706e-2433.19Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP31_MAIZE4.615e-2433.64Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
AQP2_BOVIN7.872e-2432.62Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP32_ORYSJ1.028e-2331.49Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionDC900105 VSS Citrus sinensis cDNA clone VS27V20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900105 ID=DC900105; Name=DC900105; organism=Citrus sinensis; type=EST; length=776bp
CCAAAACTATGCCTTGTTTGGAATGAACATTATCCTCCTGGTTTCCTCAG
AAAGGTTATTGCTGAGATAATAGCAACATATTTGCTGGTTTTTGTGACCT
GTGGCTCAGCTGCTTTGAGTGCATATGATGAACATAGAGTATCAAAGCTT
GGAGCCTCGGTTGCTGGGGGACTCATTGTCACCGTAATGATCTATGCAGT
TGGTCACATCTCTGGTGCTCATATGAATCCTGCTGTCACTCTAGCTTTTG
CTGCTGTTAGACATTTTCCCTGGAAACAGGTCCCAATTTATGCAGCAGCT
CAACTAACAGGAGCTGTATCGGCTTCCCTCACACTGCGTGTCCTATTACA
CCCAATCAAACATATTGGCACAACATCACCTTCTGGATCAGATCTCCAAG
CCCTAATCATGGAAATTGTTGTCACCTTTTCTATGATGTTCGTCACTTCA
GCCGTCGCAACTGACACCAAAGCTATAGGAGAGCTAGCAGGTATTGCAGT
TGGTTCTGCAGTTTGCATAACATCTGTTTTGGCGGGACCAGTATCGGGTG
GATCTATGAACCCAGCAAGGACAGTAGGACCGGCAATTGCTAGTTCATTC
TATAAAGGGATTTGGGTGTATTTGGTCGGACCGGNTACTGGAACTTTCAT
GGGAGCATGGTCTTACAATATGATCCGGGAGACCGATAAGCCAGCCCATG
CAATTTCCCAGGCTCGGTATCGGTCAACTTGCCGGCTGNAAAGTATGAGC
AGCTACAGAAGACCTTTGAGCTTGTA
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