DC900089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.921e-63 Identity = 116/225 (51.56%), Postives = 160/225 (71.11%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+QR LMELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + ++ A + E+D E V + + A++ +C EAGM A+R R ++ +DF K R Sbjct: 175 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYR 399
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.921e-63 Identity = 115/225 (51.11%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A+A++ A F++VV S + KY+GE R++R++F A+++ P IIF+DE+DAI RF T ADRE+QR LMELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + ++ + + E+D E V + + A++ +C EAGM A+R R ++ +DF K R Sbjct: 170 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 394
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 8.394e-63 Identity = 116/240 (48.33%), Postives = 167/240 (69.58%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYN 722 ++ELPL+ +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++ A F++V S + KY+GE R++R++F AR+ P I+F+DE+D+I +RF TSADRE+QR L+ELLNQ+DGFD VK+IMATNR D +DPALLRPGRLDRKIE PLP+ + + + + ++ + +D E++V E + AD+ ++C EAGM A+RA R V DF +A K+ E + A YN Sbjct: 149 TVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVERSGTQ-PAFYN 387
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 240.35 bits (612), Expect = 1.096e-62 Identity = 117/235 (49.79%), Postives = 169/235 (71.91%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLES 707 S+ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL R++F A ++ P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATN+ + LDPAL+RPGR+DRKI P+ ++ +IL IH + + +++ E +V + +GAD++ +CTEAG+ A+R R V EDF +A ++ + K E+ Sbjct: 197 SVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEEN 431
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.190e-62 Identity = 116/225 (51.56%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++C E+GM A+R R V+ +DF KA + Sbjct: 180 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.190e-62 Identity = 116/225 (51.56%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++C E+GM A+R R V+ +DF KA + Sbjct: 180 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 3.190e-62 Identity = 116/225 (51.56%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++C E+GM A+R R V+ +DF KA + Sbjct: 180 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 3.190e-62 Identity = 116/225 (51.56%), Postives = 161/225 (71.56%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVR 677 ++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F A+++ P IIF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + I + + E+D E V + +GAD+ ++C E+GM A+R R V+ +DF KA + Sbjct: 180 AVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 9.281e-62 Identity = 117/236 (49.58%), Postives = 164/236 (69.49%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESS 710 ++E PL+NPE F VG++PP GVLL+GPPGTGKT+LA+A+A+ DA+F+K+ S ++ K+IGE +RL+R++F A P IIF+DEIDA+ +R TS D E+QRT+M+LL+++DGFD+ G +++I ATNR D+LD A+LRPGR DR IE+P PN +R IL+IHA + +D+ + F+GA L ++ TEAGM AIR +RD V +DF A KL ESS Sbjct: 167 AVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAEGDTESS 402
BLAST of DC900089 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.857e-61 Identity = 113/232 (48.71%), Postives = 169/232 (72.84%), Query Frame = 3 Query: 3 SIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAK 695 ++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ RL+R++F A +H P I+F+DEIDAIG +R+ + A+REIQRT++ELLNQLDGFD + +K+IMATNR LDPAL+RPGR+DRKI P+E ++ +I IH + + +++ E +++ + +GA+++ + +EAG+ A+R R V+ +DF +A K+ + K Sbjct: 206 AVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTK 437 The following BLAST results are available for this feature:
BLAST of DC900089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900089 ID=DC900089; Name=DC900089; organism=Citrus sinensis; type=EST; length=899bpback to top |